RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 CYB561P49447 251 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 ALDH3A2P51648 485 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 DLX5P56178 289 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 COL28A1Q2UY09 1125 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 FGD3Q5JSP0 725 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 DCST1Q5T197 706 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 OTUD3Q5T2D3 398 aaPredicted RBP13.78□□□□□ -0.2
PTPN20-206ENST00000395722 SWT1Q5T5J6 900 aaKnown RBP13.78□□□□□ -0.2
PTPN20-206ENST00000395722 PODNL1Q6PEZ8 512 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 IZUMO2Q6UXV1 221 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 TMCO5AQ8N6Q1 288 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 GPR119Q8TDV5 335 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 ZNF597Q96LX8 424 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 RBM4BQ9BQ04 359 aaKnown RBP13.78□□□□□ -0.2
PTPN20-206ENST00000395722 RBM4Q9BWF3 364 aaKnown RBP13.78□□□□□ -0.2
PTPN20-206ENST00000395722 RNF32Q9H0A6 362 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 VCXQ9H320 206 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 CCDC86Q9H6F5 360 aaKnown RBP13.78□□□□□ -0.2
PTPN20-206ENST00000395722 TMEFF2Q9UIK5 374 aaPredicted RBP13.78□□□□□ -0.2
PTPN20-206ENST00000395722 TMCC3Q9ULS5 477 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 SLC7A7Q9UM01 511 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 CACNA1AO00555 2505 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 ANKUB1A6NFN9 424 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 CHP2O43745 196 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 CEACAM4O75871 244 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 CCNB2O95067 398 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 UQCRBP14927 111 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 CD96P40200 585 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 EIF2S3P41091 472 aaKnown RBP13.78□□□□□ -0.2
PTPN20-206ENST00000395722 AQP4P55087 323 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 TUBA3CQ13748 450 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 AGAP7PQ5VUJ5 663 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 ANKRD34AQ69YU3 496 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 KDM4DQ6B0I6 523 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 WBP2NLQ6ICG8 309 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 TUBA3EQ6PEY2 450 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 ULK3Q6PHR2 472 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 ISLR2Q6UXK2 745 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 LINC00114Q6XXX2 140 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 WDR88Q6ZMY6 472 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 MDGA2Q7Z553 956 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 NKAIN4Q8IVV8 208 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 SPACA3Q8IXA5 215 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 GALNT4Q8N4A0 578 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 LINC00471Q8N535 108 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 FADS6Q8N9I5 356 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 OR10G2Q8NGC3 310 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 DNAJA4Q8WW22 397 aaPredicted RBP13.78□□□□□ -0.2
PTPN20-206ENST00000395722 C3orf49Q96BT1 292 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 AGAP4Q96P64 663 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 ZNF426Q9BUY5 554 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 ZNF552Q9H707 407 aaPredicted RBP13.78□□□□□ -0.2
PTPN20-206ENST00000395722 SMURF2Q9HAU4 748 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 GPR83Q9NYM4 423 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 KCNMB2Q9Y691 235 aa13.78□□□□□ -0.2
PTPN20-206ENST00000395722 A0A087WUU8 490 aa13.77□□□□□ -0.21
PTPN20-206ENST00000395722 C7orf72A4D263 438 aa13.77□□□□□ -0.21
PTPN20-206ENST00000395722 C2orf72A6NCS6 295 aa13.77□□□□□ -0.21
PTPN20-206ENST00000395722 PGCP20142 388 aa13.77□□□□□ -0.21
PTPN20-206ENST00000395722 CBLP22681 906 aa13.77□□□□□ -0.21
PTPN20-206ENST00000395722 IDH2P48735 452 aaKnown RBP13.77□□□□□ -0.21
PTPN20-206ENST00000395722 DAPP51397 102 aa13.77□□□□□ -0.21
PTPN20-206ENST00000395722 CCR4P51679 360 aa13.77□□□□□ -0.21
PTPN20-206ENST00000395722 COPZ1P61923 177 aa13.77□□□□□ -0.21
PTPN20-206ENST00000395722 MFAP5Q13361 173 aa13.77□□□□□ -0.21
PTPN20-206ENST00000395722 CBFBQ13951 182 aa13.77□□□□□ -0.21
PTPN20-206ENST00000395722 DEFB109BQ30KR1 87 aa13.77□□□□□ -0.21
PTPN20-206ENST00000395722 WDSUB1Q8N9V3 476 aa13.77□□□□□ -0.21
PTPN20-206ENST00000395722 ACOT11Q8WXI4 607 aaPredicted RBP13.77□□□□□ -0.21
PTPN20-206ENST00000395722 SLC38A4Q969I6 547 aa13.77□□□□□ -0.21
PTPN20-206ENST00000395722 MPP4Q96JB8 637 aa13.77□□□□□ -0.21
PTPN20-206ENST00000395722 ZNF184Q99676 751 aaPredicted RBP13.77□□□□□ -0.21
PTPN20-206ENST00000395722 UTP23Q9BRU9 249 aaKnown RBP13.77□□□□□ -0.21
PTPN20-206ENST00000395722 TACO1Q9BSH4 297 aaKnown RBP13.77□□□□□ -0.21
PTPN20-206ENST00000395722 ADAM19Q9H013 955 aa13.77□□□□□ -0.21
PTPN20-206ENST00000395722 C12orf10Q9HB07 376 aa13.77□□□□□ -0.21
PTPN20-206ENST00000395722 PPP4R1LQ9P1A2 415 aa13.77□□□□□ -0.21
PTPN20-206ENST00000395722 ETV2O00321 342 aaPredicted RBP13.76□□□□□ -0.21
PTPN20-206ENST00000395722 NEURL1O76050 574 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 WDPCPO95876 746 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 ANXA8P13928 327 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 CASRP41180 1078 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 SLC1A3P43003 542 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 PRAMEF20Q5VT98 475 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 CADM2Q8N3J6 435 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 PSD4Q8NDX1 1056 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 OR2M3Q8NG83 312 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 OR4K5Q8NGD3 323 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 OR9Q2Q8NGE9 314 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 TMEM41AQ96HV5 264 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 FEVQ99581 238 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 SACM1LQ9NTJ5 587 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 ANKRD10Q9NXR5 420 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 PCNX3Q9H6A9 2034 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 ACACAQ13085 2346 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 EML6Q6ZMW3 1958 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 SNPHO15079 494 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 TRIM3O75382 744 aaPredicted RBP13.76□□□□□ -0.21
PTPN20-206ENST00000395722 SNX4O95219 450 aa13.76□□□□□ -0.21
PTPN20-206ENST00000395722 NTN1O95631 604 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms