RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 COMMD2Q86X83 199 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 ANKRD13BQ86YJ7 626 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 OR8D4Q8NGM9 314 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 MAFAQ8NHW3 353 aaPredicted RBP14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 ZFP3Q96NJ6 502 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 PPIEQ9UNP9 301 aaKnown RBP14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 A8MV72 311 aaPredicted RBP14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 EIF1AYO14602 144 aaKnown RBP14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 CPNE6O95741 557 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 SLC35E2P0CK97 266 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 NME1P15531 152 aaKnown RBP14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 RPS5P46782 204 aaKnown RBP14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 CCR5P51681 352 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 GUSBP11Q6P575 273 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 THEM6Q8WUY1 208 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 ENKD1Q9H0I2 346 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 UBQLN3Q9H347 655 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 HINT3Q9NQE9 182 aaKnown RBP14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 GRIP1Q9Y3R0 1128 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 FAM221BA6H8Z2 402 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 TLCD2A6NGC4 264 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 CSO75390 466 aaKnown RBP14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 CD79BP40259 229 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 HSD11B2P80365 405 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 COX10Q12887 443 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 RSBN1Q5VWQ0 802 aaPredicted RBP14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 IL20RBQ6UXL0 311 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 SYT9Q86SS6 491 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 MARCH3Q86UD3 253 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 GPAT4Q86UL3 456 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 CROCCP3Q8IVE0 287 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 KLHL36Q8N4N3 616 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 ZNF346Q9UL40 294 aaKnown RBP14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 RPH3AQ9Y2J0 694 aaPredicted RBP14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 PIAS2O75928 621 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 NID1P14543 1247 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 MAKP20794 623 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 CXCR4P61073 352 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 TSPAN31Q12999 210 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 CTF1Q16619 201 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 TCTE1Q5JU00 501 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 CBLN3Q6UW01 205 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 ASB18Q6ZVZ8 466 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 DUSP19Q8WTR2 217 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 NMNAT3Q96T66 252 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 RPRD1BQ9NQG5 326 aaKnown RBP14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 SLC6A5Q9Y345 797 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 CTNSO60931 367 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 BMP4P12644 408 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 C21orf58P58505 322 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 NANOGNBQ7Z5D8 188 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 OR6C4Q8NGE1 309 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 GABARAPL3Q9BY60 117 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 WDR12Q9GZL7 423 aaKnown RBP14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 TMEM184BQ9Y519 407 aaPredicted RBP14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 COL4A4P53420 1690 aaPredicted RBP14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 TICRRQ7Z2Z1 1910 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 PLXNB3Q9ULL4 1909 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 LMO7DNF2Z398 122 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 M0R082 166 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 FAM53BQ14153 422 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 PGGHGQ32M88 737 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 TRIM61Q5EBN2 209 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 LYPD4Q6UWN0 246 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 CCDC80Q76M96 950 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 OR52I1Q8NGK6 324 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 ORAI1Q96D31 301 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 POLDIP3Q9BY77 421 aaKnown RBP14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 GABARAPL1Q9H0R8 117 aa14.69□□□□□ -0.06
SMARCD1-202ENST00000394963 FABP12A6NFH5 140 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 ANKRD61A6NGH8 418 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 HRO43593 1189 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 ALOX12BO75342 701 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 AQP2P41181 271 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 CTXN1P60606 82 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 RPS25P62851 125 aaKnown RBP14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 UBE2IP63279 158 aaKnown RBP14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 GFOD2Q3B7J2 385 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 PRAMEF20Q5VT98 475 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 KIAA1958Q8N8K9 716 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 C19orf18Q8NEA5 215 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 NEIL3Q8TAT5 605 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 ZNF775Q96BV0 537 aaPredicted RBP14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 RASD2Q96D21 266 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 CRELD1Q96HD1 420 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 KCTD7Q96MP8 289 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 XKRYO14609 159 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 ZIC2O95409 532 aaPredicted RBP14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 SDHBP21912 280 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 RORAP35398 523 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 CLDN6P56747 220 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 PRICKLE4Q2TBC4 344 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 SLX4IPQ5VYV7 408 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 TRIQKQ629K1 86 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 SLC16A12Q6ZSM3 486 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 KIF18BQ86Y91 864 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 OR5M1Q8NGP8 315 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 C10orf90Q96M02 699 aa14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 RSPO3Q9BXY4 272 aaPredicted RBP14.68□□□□□ -0.06
SMARCD1-202ENST00000394963 PILRAQ9UKJ1 303 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms