RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 AIG1Q9NVV5 245 aa7.9□□□□□ -1.14
ATG4A-205ENST00000394892 BEX4Q9NWD9 120 aaPredicted RBP7.9□□□□□ -1.14
ATG4A-205ENST00000394892 FAF1Q9UNN5 650 aaPredicted RBP7.9□□□□□ -1.14
ATG4A-205ENST00000394892 MED12LQ86YW9 2145 aa7.9□□□□□ -1.15
ATG4A-205ENST00000394892 NIPBLQ6KC79 2804 aaeCLIP7.89□□□□□ -1.15
ATG4A-205ENST00000394892 IGHV3-15A0A0B4J1V0 119 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 GOLGA8QA0A0J9YX86 632 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 A0A1W2PNR3 127 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 GOLGA8OA6NCC3 632 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 GOLGA8NF8WBI6 632 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 HMGN4O00479 90 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 CASKO14936 926 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 KIAA0513O60268 411 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 GCM2O75603 506 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-205ENST00000394892 PLAUP00749 431 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 HEXAP06865 529 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 TUBBP07437 444 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 POU2F1P14859 743 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 ATP6V1C1P21283 382 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 AGTR1P30556 359 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 HOXC12P31275 282 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 NTF4P34130 210 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 PGM1P36871 562 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 ZNF41P51814 821 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-205ENST00000394892 MVDP53602 400 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 CARD18P57730 90 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 RPS3AP61247 264 aaKnown RBP7.89□□□□□ -1.15
ATG4A-205ENST00000394892 EEF1A1P68104 462 aaKnown RBP7.89□□□□□ -1.15
ATG4A-205ENST00000394892 NKX6-1P78426 367 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-205ENST00000394892 CHRNEQ04844 493 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 MAD2L1Q13257 205 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-205ENST00000394892 QPRTQ15274 297 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 TSC22D1Q15714 1073 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 GPR68Q15743 365 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 SGCBQ16585 318 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 EXOC3L2Q2M3D2 409 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 TMEM176BQ3YBM2 270 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-205ENST00000394892 FAM174BQ3ZCQ3 159 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 SLC9B1Q4ZJI4 515 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 COX20Q5RI15 118 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 EEF1A1P5Q5VTE0 462 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 SEZ6L2Q6UXD5 910 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 ESPNLQ6ZVH7 1005 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 ATG4DQ86TL0 474 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-205ENST00000394892 P3H2Q8IVL5 708 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 ANKFN1Q8N957 763 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 OR6K3Q8NGY3 331 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 OR5W2Q8NH69 310 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 MGARPQ8TDB4 240 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 RNF128Q8TEB7 428 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 XAGE5Q8WWM1 108 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 ZNF75CPQ92670 426 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-205ENST00000394892 ARL8AQ96BM9 186 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 MOAP1Q96BY2 351 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 NEURL3Q96EH8 262 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 DTNBP1Q96EV8 351 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 GMPPAQ96IJ6 420 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-205ENST00000394892 MAELQ96JY0 434 aaKnown RBP7.89□□□□□ -1.15
ATG4A-205ENST00000394892 SLC35G5Q96KT7 338 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 OR52B2Q96RD2 323 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 PRPF18Q99633 342 aaKnown RBP7.89□□□□□ -1.15
ATG4A-205ENST00000394892 PAIP2Q9BPZ3 127 aaKnown RBP7.89□□□□□ -1.15
ATG4A-205ENST00000394892 LAT2Q9GZY6 243 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 HOXD1Q9GZZ0 328 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 OCEL1Q9H607 264 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 TMBIM4Q9HC24 238 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 ELOVL5Q9NYP7 299 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 MARCOQ9UEW3 520 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-205ENST00000394892 PROCRQ9UNN8 238 aa7.89□□□□□ -1.15
ATG4A-205ENST00000394892 MPDZO75970 2070 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 ZNF814B7Z6K7 855 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 E9PBE3 544 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 C16orf97H3BN30 126 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 SMAD9O15198 467 aaKnown RBP7.88□□□□□ -1.15
ATG4A-205ENST00000394892 ZNF264O43296 627 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 EIF4E2O60573 245 aaKnown RBP7.88□□□□□ -1.15
ATG4A-205ENST00000394892 GSNP06396 782 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 CHRM4P08173 479 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 GUSBP08236 651 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 KRT16P08779 473 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 UBL4AP11441 157 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 HPGDP15428 266 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 UQCRC2P22695 453 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 ELK4P28324 431 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 ADH6P28332 368 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 EIF1P41567 113 aaKnown RBP7.88□□□□□ -1.15
ATG4A-205ENST00000394892 SUMO3P55854 103 aaPredicted RBP7.88□□□□□ -1.15
ATG4A-205ENST00000394892 SESN3P58005 492 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 MAGOHP61326 146 aaKnown RBP7.88□□□□□ -1.15
ATG4A-205ENST00000394892 FGFBP1Q14512 234 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 SYPL1Q16563 259 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 GTDC1Q4AE62 458 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 PPP4R4Q6NUP7 873 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 TFAP2EQ6VUC0 442 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 RNF130Q86XS8 419 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 TUSC5Q8IXB3 177 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 LRRC34Q8IZ02 419 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 GABRG1Q8N1C3 465 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 ZNF614Q8N883 585 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 ZNF527Q8NB42 609 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms