RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 DSPPQ9NZW4 1301 aa6.42□□□□□ -1.38
RTN4-205ENST00000394609 ADAMTS9Q9P2N4 1935 aa6.42□□□□□ -1.38
RTN4-205ENST00000394609 EFCAB9A8MZ26 197 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 D6RAR5 112 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 PEX12O00623 359 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 STX11O75558 287 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 SCRG1O75711 98 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 SLITRK5O94991 958 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 LDOC1O95751 146 aaPredicted RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 ANGPTL1O95841 491 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 LGI1O95970 557 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 IL7RP16871 459 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 PRKCAP17252 672 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 S100A5P33763 92 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 RCVRNP35243 200 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 MAP3K8P41279 467 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 GRK6P43250 576 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 HTR3AP46098 478 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 DUSP3P51452 185 aaPredicted RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 MAPK10P53779 464 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 COPZ1P61923 177 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 RHAGQ02094 409 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 SERTAD2Q14140 314 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 SF3A2Q15428 464 aaKnown RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 NPTX1Q15818 432 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 MAPK14Q16539 360 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 MEP1AQ16819 746 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 MICAQ29983 383 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 COLEC12Q5KU26 742 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 EXOSC6Q5RKV6 272 aaKnown RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 RSBN1Q5VWQ0 802 aaPredicted RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 FAAH2Q6GMR7 532 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 RHBDD2Q6NTF9 364 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 FAHD1Q6P587 224 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 ZCCHC12Q6PEW1 402 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 ZAR1Q86SH2 424 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 ZNF605Q86T29 641 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 SLITRK4Q8IW52 837 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 UBQLNLQ8IYU4 475 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 TAGAPQ8N103 731 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 CACTIN-AS1Q8N1I8 211 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 OR10G2Q8NGC3 310 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 C16orf52Q8NHV5 167 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 ARSGQ96EG1 525 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 VSTM2LQ96N03 204 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 OR1F2PQ96R84 312 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 STACQ99469 402 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 MESP1Q9BRJ9 268 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 PINK1Q9BXM7 581 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 OR8D2Q9GZM6 311 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 ZNF350Q9GZX5 532 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 MRPL18Q9H0U6 180 aaKnown RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 OR10A5Q9H207 317 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 FOLH1BQ9HBA9 442 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 KRT84Q9NSB2 600 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 KCNE5Q9UJ90 142 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 SLC13A4Q9UKG4 626 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 RARRES3Q9UL19 164 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 SLC9A8Q9Y2E8 581 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 NTNG1Q9Y2I2 539 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 CFAP54Q96N23 3096 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 ASCC3Q8N3C0 2202 aaKnown RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 TP53BP1Q12888 1972 aaPredicted RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 TNRC6BQ9UPQ9 1833 aaKnown RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 IGKV3D-11A0A0A0MRZ8 115 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 EFCAB7A8K855 629 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 CENPXA8MT69 81 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 E9PQ18 207 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 NTN3O00634 580 aaPredicted RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 BCKDKO14874 412 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 RGS10O43665 173 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 PRAMEF2O60811 474 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 TRIM3O75382 744 aaPredicted RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 UGT2B17O75795 530 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 CCNB2O95067 398 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 NKX2-2O95096 273 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 DLGAP3O95886 979 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 IGKV1D-16P01601 117 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 H1F0P07305 194 aaKnown RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 CCL4P13236 92 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 CSTF2P33240 577 aaKnown RBP eCLIP6.41□□□□□ -1.38
RTN4-205ENST00000394609 LIMS1P48059 325 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 HMGA2P52926 109 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 UGT2B15P54855 530 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 POU6F2P78424 691 aaPredicted RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 FUT7Q11130 342 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 SEC23BQ15437 767 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 ZNHIT3Q15649 155 aaPredicted RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 TBCEQ15813 527 aaPredicted RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 NKAIN1Q4KMZ8 207 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 FLYWCH1Q4VC44 716 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 SMUG1Q53HV7 270 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 YOD1Q5VVQ6 348 aaPredicted RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 CCBE1Q6UXH8 406 aaPredicted RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 NPSR1Q6W5P4 371 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 ZNF836Q6ZNA1 936 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 Q6ZPB1 254 aaPredicted RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 COX15Q7KZN9 410 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 PPP1R3BQ86XI6 285 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 ZNF619Q8N2I2 560 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms