RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 TNS1Q9HBL0 1735 aaKnown RBP15.02■□□□□ -0
PCDH1-203ENST00000394536 TNFRSF10AO00220 468 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 SCO1O75880 301 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 PSMD4P55036 377 aaKnown RBP15.02■□□□□ -0
PCDH1-203ENST00000394536 SNTA1Q13424 505 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 ENPP2Q13822 863 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 C4orf46Q504U0 113 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 WDR45BQ5MNZ6 344 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 TMEM69Q5SWH9 247 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 ZNF770Q6IQ21 691 aaPredicted RBP15.02■□□□□ -0
PCDH1-203ENST00000394536 RFPL4BQ6ZWI9 263 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 TMED4Q7Z7H5 227 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 ZFAND1Q8TCF1 268 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 GCDHQ92947 438 aaPredicted RBP15.02■□□□□ -0
PCDH1-203ENST00000394536 SLC25A36Q96CQ1 311 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 ATF6BQ99941 703 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 PDCD1LG2Q9BQ51 273 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 SLC6A17Q9H1V8 727 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 PRSS16Q9NQE7 514 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 MAFFQ9ULX9 164 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 RCE1Q9Y256 329 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 CABIN1Q9Y6J0 2220 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 ANKRD61A6NGH8 418 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 ELOA3DA6NLF2 546 aaPredicted RBP15.02■□□□□ -0
PCDH1-203ENST00000394536 NUPL2O15504 423 aaKnown RBP15.02■□□□□ -0
PCDH1-203ENST00000394536 C1QBP02746 253 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 TCRBP04435 133 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 DBIP07108 87 aaKnown RBP15.02■□□□□ -0
PCDH1-203ENST00000394536 ELOA3BQ3SY89 546 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 TMPRSS12Q86WS5 348 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 SIRT6Q8N6T7 355 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 LINC01555Q8NAE3 123 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 ELOA3Q8NG57 546 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 DNAJA4Q8WW22 397 aaPredicted RBP15.02■□□□□ -0
PCDH1-203ENST00000394536 SMARCD2Q92925 531 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 UPRTQ96BW1 309 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 OR2M4Q96R27 311 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 METTL17Q9H7H0 456 aaPredicted RBP15.02■□□□□ -0
PCDH1-203ENST00000394536 MAB21L2Q9Y586 359 aa15.02■□□□□ -0
PCDH1-203ENST00000394536 STK25O00506 426 aa15.02□□□□□ -0.01
PCDH1-203ENST00000394536 MAS1P04201 325 aa15.02□□□□□ -0.01
PCDH1-203ENST00000394536 FPR3P25089 353 aa15.02□□□□□ -0.01
PCDH1-203ENST00000394536 PTGS2P35354 604 aa15.02□□□□□ -0.01
PCDH1-203ENST00000394536 CDK5Q00535 292 aa15.02□□□□□ -0.01
PCDH1-203ENST00000394536 METAP1DQ6UB28 335 aaPredicted RBP15.02□□□□□ -0.01
PCDH1-203ENST00000394536 ZNF620Q6ZNG0 422 aa15.02□□□□□ -0.01
PCDH1-203ENST00000394536 RDH10Q8IZV5 341 aa15.02□□□□□ -0.01
PCDH1-203ENST00000394536 CREB3L1Q96BA8 519 aa15.02□□□□□ -0.01
PCDH1-203ENST00000394536 ADAM29Q9UKF5 820 aa15.02□□□□□ -0.01
PCDH1-203ENST00000394536 GXYLT2A0PJZ3 443 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 TMEM229AB2RXF0 380 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 RNGTTO60942 597 aaKnown RBP15.01□□□□□ -0.01
PCDH1-203ENST00000394536 EIF4EP06730 217 aaKnown RBP15.01□□□□□ -0.01
PCDH1-203ENST00000394536 RPS21P63220 83 aaKnown RBP15.01□□□□□ -0.01
PCDH1-203ENST00000394536 E2F1Q01094 437 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 FOXK2Q01167 660 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 ZNF782Q6ZMW2 699 aaPredicted RBP15.01□□□□□ -0.01
PCDH1-203ENST00000394536 OR7G2Q8NG99 324 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 WDFY2Q96P53 400 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 FN3KQ9H479 309 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 KCMF1Q9P0J7 381 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 MRPS33Q9Y291 106 aaKnown RBP15.01□□□□□ -0.01
PCDH1-203ENST00000394536 PCYT1BQ9Y5K3 369 aaPredicted RBP15.01□□□□□ -0.01
PCDH1-203ENST00000394536 HEBP2Q9Y5Z4 205 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 ARPC1BO15143 372 aaKnown RBP15.01□□□□□ -0.01
PCDH1-203ENST00000394536 ITGA10O75578 1167 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 CXCL10P02778 98 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 HRGP04196 525 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 PCBP4P57723 403 aaKnown RBP15.01□□□□□ -0.01
PCDH1-203ENST00000394536 GMFBP60983 142 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 TRA2BP62995 288 aaKnown RBP15.01□□□□□ -0.01
PCDH1-203ENST00000394536 C1orf61Q13536 156 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 DCST2Q5T1A1 773 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 HLA-DQA1Q5Y7H0 255 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 GIMAP1Q8WWP7 306 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 FGF13Q92913 245 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 PIGUQ9H490 435 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 SYNPO2LQ9H987 977 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 UBQLN2Q9UHD9 624 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 A0A0A6YYJ9 748 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 POM121CA8CG34 1229 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 CSTAP01040 98 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 GNRH1P01148 92 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 ALDOBP05062 364 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 TRAPPC2P0DI81 140 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 TRAPPC2BP0DI82 140 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 HLA-DMAP28067 261 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 FAM78AQ5JUQ0 283 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 ZNF776Q68DI1 518 aaPredicted RBP15.01□□□□□ -0.01
PCDH1-203ENST00000394536 FIGLAQ6QHK4 219 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 COMMD2Q86X83 199 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 PHOSPHO1Q8TCT1 267 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 TEAD3Q99594 435 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 GTPBP2Q9BX10 602 aaKnown RBP15.01□□□□□ -0.01
PCDH1-203ENST00000394536 NIPAL2Q9H841 368 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 POLHQ9Y253 713 aa15.01□□□□□ -0.01
PCDH1-203ENST00000394536 MEIS3P1A6NDR6 274 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 SURF4O15260 269 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 FNTBP49356 437 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 STARP49675 285 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms