RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 TRIM2Q9C040 744 aa16.45■□□□□ 0.22
CLDND1-204ENST00000394185 OR52D1Q9H346 318 aa16.45■□□□□ 0.22
CLDND1-204ENST00000394185 HHATLQ9HCP6 504 aa16.45■□□□□ 0.22
CLDND1-204ENST00000394185 CNOT2Q9NZN8 540 aaKnown RBP16.45■□□□□ 0.22
CLDND1-204ENST00000394185 COPS7AQ9UBW8 275 aa16.45■□□□□ 0.22
CLDND1-204ENST00000394185 CLEC2DQ9UHP7 191 aa16.45■□□□□ 0.22
CLDND1-204ENST00000394185 CFL2Q9Y281 166 aa16.45■□□□□ 0.22
CLDND1-204ENST00000394185 CARD8Q9Y2G2 431 aa16.45■□□□□ 0.22
CLDND1-204ENST00000394185 UNC119BA6NIH7 251 aa16.45■□□□□ 0.22
CLDND1-204ENST00000394185 NOL3O60936 208 aaKnown RBP16.45■□□□□ 0.22
CLDND1-204ENST00000394185 REM1O75628 298 aa16.45■□□□□ 0.22
CLDND1-204ENST00000394185 HEXBP07686 556 aa16.45■□□□□ 0.22
CLDND1-204ENST00000394185 HPGDP15428 266 aa16.45■□□□□ 0.22
CLDND1-204ENST00000394185 ZNF550Q7Z398 422 aa16.45■□□□□ 0.22
CLDND1-204ENST00000394185 ANKRD37Q7Z713 158 aa16.45■□□□□ 0.22
CLDND1-204ENST00000394185 RNF113BQ8IZP6 322 aaKnown RBP16.45■□□□□ 0.22
CLDND1-204ENST00000394185 TMEM163Q8TC26 289 aa16.45■□□□□ 0.22
CLDND1-204ENST00000394185 FANK1Q8TC84 345 aa16.45■□□□□ 0.22
CLDND1-204ENST00000394185 Q96MT0 163 aa16.45■□□□□ 0.22
CLDND1-204ENST00000394185 MED31Q9Y3C7 131 aa16.45■□□□□ 0.22
CLDND1-204ENST00000394185 COL5A1P20908 1838 aaPredicted RBP16.45■□□□□ 0.22
CLDND1-204ENST00000394185 LRRN3E7EW58 273 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 SURF4O15260 269 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 SAGP10523 405 aaPredicted RBP16.44■□□□□ 0.22
CLDND1-204ENST00000394185 CSTF2P33240 577 aaKnown RBP eCLIP16.44■□□□□ 0.22
CLDND1-204ENST00000394185 TGFBR1P36897 503 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 CCR4P51679 360 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 TIGD6Q17RP2 521 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 PGGHGQ32M88 737 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 FAM199XQ6PEV8 388 aaPredicted RBP16.44■□□□□ 0.22
CLDND1-204ENST00000394185 PAQR6Q6TCH4 344 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 CMIPQ8IY22 773 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 FAM71CQ8NEG0 241 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 UBQLN3Q9H347 655 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 LNP1A1A4G5 178 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 SCDO00767 359 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 ABCD3P28288 659 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 SKP2Q13309 424 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 SMARCD3Q6STE5 483 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 LINC00114Q6XXX2 140 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 OVCH1Q7RTY7 1134 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 BMPERQ8N8U9 685 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 APCDD1LQ8NCL9 501 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 BBS1Q8NFJ9 593 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 OR51A7Q8NH64 312 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 THAP3Q8WTV1 239 aaPredicted RBP16.44■□□□□ 0.22
CLDND1-204ENST00000394185 C8orf44Q96CB5 159 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 SPSB2Q99619 263 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 CDCA4Q9BXL8 241 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 GPN2Q9H9Y4 310 aaPredicted RBP16.44■□□□□ 0.22
CLDND1-204ENST00000394185 KRCC1Q9NPI7 259 aaPredicted RBP16.44■□□□□ 0.22
CLDND1-204ENST00000394185 R4GN57 208 aa16.44■□□□□ 0.22
CLDND1-204ENST00000394185 MEN1O00255 615 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 GABARAPO95166 117 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 HSMCR30P0CW71 290 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 PIPP12273 146 aaPredicted RBP16.43■□□□□ 0.22
CLDND1-204ENST00000394185 CD36P16671 472 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 MST1P26927 711 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 AVPR2P30518 371 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 ZFP36L1Q07352 338 aaKnown RBP16.43■□□□□ 0.22
CLDND1-204ENST00000394185 CRYZQ08257 329 aaKnown RBP16.43■□□□□ 0.22
CLDND1-204ENST00000394185 ZNF528Q3MIS6 628 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 SLC25A30Q5SVS4 291 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 SLC35F1Q5T1Q4 408 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 HLA-DQA1Q5Y7H0 255 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 ULK3Q6PHR2 472 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 TMPRSS11FQ6ZWK6 438 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 SLC29A4Q7RTT9 530 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 P2RY8Q86VZ1 359 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 ZNF441Q8N8Z8 693 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 OR2T33Q8NG76 320 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 WDR36Q8NI36 951 aaKnown RBP16.43■□□□□ 0.22
CLDND1-204ENST00000394185 SH3YL1Q96HL8 342 aaPredicted RBP16.43■□□□□ 0.22
CLDND1-204ENST00000394185 HS6ST2Q96MM7 605 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 SLC38A2Q96QD8 506 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 SIGLEC7Q9Y286 467 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 SLC35A3Q9Y2D2 325 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 RPL36Q9Y3U8 105 aaKnown RBP16.43■□□□□ 0.22
CLDND1-204ENST00000394185 TEX51A0A1B0GUA7 166 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 FAM183AA6NL82 134 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 ZNF354AO60765 605 aaPredicted RBP16.43■□□□□ 0.22
CLDND1-204ENST00000394185 ALOX12BO75342 701 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 UBL4AP11441 157 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 DUSP3P51452 185 aaPredicted RBP16.43■□□□□ 0.22
CLDND1-204ENST00000394185 CTBP2P56545 445 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 VBP1P61758 197 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 PLCXD2Q0VAA5 305 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 FHL1Q13642 323 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 SHFQ7M4L6 423 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 SLCO6A1Q86UG4 719 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 TMCO5AQ8N6Q1 288 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 ZNF527Q8NB42 609 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 ANKK1Q8NFD2 765 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 C3orf49Q96BT1 292 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 OMA1Q96E52 524 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 ART5Q96L15 291 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 RPS6KB2Q9UBS0 482 aa16.43■□□□□ 0.22
CLDND1-204ENST00000394185 KIF26BQ2KJY2 2108 aa16.42■□□□□ 0.22
CLDND1-204ENST00000394185 VSTM2BA6NLU5 285 aa16.42■□□□□ 0.22
CLDND1-204ENST00000394185 TSPAN2O60636 221 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms