RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 AGERQ15109 404 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 NDUFA9Q16795 377 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 ZNF658BQ4V348 819 aaPredicted RBP10.36□□□□□ -0.75
CUX1-204ENST00000393824 KIAA1161Q6NSJ0 714 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 TMEM220Q6QAJ8 160 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 NR2C2APQ86WQ0 139 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 SPEM1Q8N4L4 309 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 OR4K1Q8NGD4 311 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 CXorf58Q96LI9 332 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 NRTNQ99748 197 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 SPATA5L1Q9BVQ7 753 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 METTL17Q9H7H0 456 aaPredicted RBP10.36□□□□□ -0.75
CUX1-204ENST00000393824 PLEKHM1Q9Y4G2 1056 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 C2orf92A0A1B0GVN3 265 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 GNG14A0A1W2PPG7 69 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 DNASE2O00115 360 aaPredicted RBP10.35□□□□□ -0.75
CUX1-204ENST00000393824 FOXE1O00358 373 aaPredicted RBP10.35□□□□□ -0.75
CUX1-204ENST00000393824 CHST10O43529 356 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 SSNA1O43805 119 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 SELENOFO60613 162 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 SOX30O94993 753 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 EIF4EP06730 217 aaKnown RBP10.35□□□□□ -0.75
CUX1-204ENST00000393824 LPLP06858 475 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 CELP19835 753 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 BCKDHBP21953 392 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 CD79BP40259 229 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 SLC1A3P43003 542 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 TSPAN5P62079 268 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 TCTE1Q5JU00 501 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 IDNKQ5T6J7 187 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 REEP3Q6NUK4 255 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 FAM83HQ6ZRV2 1179 aaPredicted RBP10.35□□□□□ -0.75
CUX1-204ENST00000393824 TRAPPC5Q8IUR0 188 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 TOMM5Q8N4H5 51 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 MOSPD2Q8NHP6 518 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 SLC7A13Q8TCU3 470 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 ASZ1Q8WWH4 475 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 LCORQ96JN0 433 aaPredicted RBP10.35□□□□□ -0.75
CUX1-204ENST00000393824 TEX101Q9BY14 249 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 SAV1Q9H4B6 383 aaPredicted RBP10.35□□□□□ -0.75
CUX1-204ENST00000393824 WDR26Q9H7D7 661 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 HPF1Q9NWY4 346 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 MAP4K5Q9Y4K4 846 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 MPTX1A8MV57 137 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 E7EQ34 232 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 TOXO94900 526 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 APOL3O95236 402 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 ETHE1O95571 254 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 FURINP09958 794 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 THBS2P35442 1172 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 SELENOPP49908 381 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 DDX39BQ13838 428 aaKnown RBP10.35□□□□□ -0.75
CUX1-204ENST00000393824 INSL4Q14641 139 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 GPR68Q15743 365 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 METTL11BQ5VVY1 283 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 B3GNTL1Q67FW5 361 aaPredicted RBP10.35□□□□□ -0.75
CUX1-204ENST00000393824 VASNQ6EMK4 673 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 ADAMTSL4Q6UY14 1074 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 SLC36A4Q6YBV0 504 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 MRGPREQ86SM8 312 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 CCDC36Q8IYA8 594 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 SLC22A18ASQ8N1D0 253 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 LINC00471Q8N535 108 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 BEST4Q8NFU0 473 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 GPR32P1Q8NGA4 272 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 OR56A3Q8NH54 315 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 YIPF5Q969M3 257 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 PPCDCQ96CD2 204 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 C12orf66Q96MD2 445 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 ZNF649Q9BS31 505 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 DPH7Q9BTV6 452 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 FGF22Q9HCT0 170 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 MYNNQ9NPC7 610 aa10.35□□□□□ -0.75
CUX1-204ENST00000393824 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.35□□□□□ -0.75
CUX1-204ENST00000393824 ANKDD1BA6NHY2 528 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 LGALS8O00214 317 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 ZNF593O00488 134 aaPredicted RBP10.34□□□□□ -0.75
CUX1-204ENST00000393824 PDCD5O14737 125 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 SSX5O60225 188 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 RGS11O94810 467 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 HPXP02790 462 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 CXCL2P19875 107 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 PRLHRP49683 370 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 ARHGDIBP52566 201 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 SMSP52788 366 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 SIGLEC14Q08ET2 396 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 SRSF5Q13243 272 aaKnown RBP10.34□□□□□ -0.75
CUX1-204ENST00000393824 MED27Q6P2C8 311 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 AGTRAPQ6RW13 159 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 LHFPL3Q86UP9 236 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 SIAH3Q8IW03 269 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 LMNTD1Q8N9Z9 388 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 POGLUT1Q8NBL1 392 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 SCARB1Q8WTV0 552 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 EDAQ92838 391 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 SGK3Q96BR1 496 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 TMPRSS13Q9BYE2 586 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 FBXW2Q9UKT8 454 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 ACSL6Q9UKU0 697 aa10.34□□□□□ -0.75
CUX1-204ENST00000393824 ICKQ9UPZ9 632 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms