RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 CD200R1Q8TD46 325 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 ADAMTS14Q8WXS8 1223 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 SH3YL1Q96HL8 342 aaPredicted RBP13.92□□□□□ -0.18
CCDC50-201ENST00000392455 ENKD1Q9H0I2 346 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 WIF1Q9Y5W5 379 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 ADAM12O43184 909 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 ZIC2O95409 532 aaPredicted RBP13.92□□□□□ -0.18
CCDC50-201ENST00000392455 DEFA4P12838 97 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 ELK1P19419 428 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 OR52P1PQ8NH57 321 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 A0A1W2PQL4 384 aaPredicted RBP13.92□□□□□ -0.18
CCDC50-201ENST00000392455 CXorf49A8MYA2 514 aaPredicted RBP13.92□□□□□ -0.18
CCDC50-201ENST00000392455 AKR1C1Q04828 323 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 MEP1AQ16819 746 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 XKR5Q6UX68 686 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 KLBQ86Z14 1044 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 ZNF696Q9H7X3 374 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 DVL1O14640 695 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 HTRA2O43464 458 aaPredicted RBP13.92□□□□□ -0.18
CCDC50-201ENST00000392455 HLA-AP01891 365 aaKnown RBP13.92□□□□□ -0.18
CCDC50-201ENST00000392455 HOXD12P35452 270 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 DVL1P1P54792 670 aaPredicted RBP13.92□□□□□ -0.18
CCDC50-201ENST00000392455 METTL2BQ6P1Q9 378 aaKnown RBP13.92□□□□□ -0.18
CCDC50-201ENST00000392455 OR2A12Q8NGT7 310 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 PTCHD1Q96NR3 888 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 HERPUD2Q9BSE4 406 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 ALG12Q9BV10 488 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 A0A1B0GV50 99 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 GLOD5A6NK44 160 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 UGDHO60701 494 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 TTTY10Q9BZA0 68 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 RYDENQ9NUL5 291 aaKnown RBP13.91□□□□□ -0.18
CCDC50-201ENST00000392455 PRRC2BQ5JSZ5 2229 aaKnown RBP13.91□□□□□ -0.18
CCDC50-201ENST00000392455 KDELR3O43731 214 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 GKP32189 559 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 ID2Q02363 134 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 SGIP1Q9BQI5 828 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 LMO7Q8WWI1 1683 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 SOCS2O14508 198 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 TIA1P31483 386 aaKnown RBP eCLIP13.91□□□□□ -0.183e-6■■□□□ 11.8
CCDC50-201ENST00000392455 APOFQ13790 326 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 TMEM139Q8IV31 216 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 NOL4LQ96MY1 436 aaPredicted RBP13.91□□□□□ -0.18
CCDC50-201ENST00000392455 RNF11Q9Y3C5 154 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 SHPRHQ149N8 1683 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 ZNF487B1APH4 448 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 LCATP04180 440 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 CNR1P21554 472 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 DMWDQ09019 674 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 SSX7Q7RTT5 188 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 ADGRF3Q8IZF5 1079 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 MTMR14Q8NCE2 650 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 PXYLP1Q8TE99 480 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 INTS12Q96CB8 462 aaKnown RBP13.91□□□□□ -0.18
CCDC50-201ENST00000392455 MRC1P22897 1456 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 CKMT2P17540 419 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 GDF5P43026 501 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 HLCSP50747 726 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 CHRNEQ04844 493 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 PRDM9Q9NQV7 894 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 OR1A2Q9Y585 309 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 LOC285095A0A1B0GVY8 99 aa13.91□□□□□ -0.18
CCDC50-201ENST00000392455 ITGB8P26012 769 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 SLC14A1Q13336 389 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 C5orf46Q6UWT4 87 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 OR1S2Q8NGQ3 325 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 MAP3K3Q99759 626 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 SIAEQ9HAT2 523 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 SLC35D1Q9NTN3 355 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 SURF4O15260 269 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 PRAMEF8Q5VWM4 474 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 PRAMEF7Q5VXH5 474 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 FOXJ1Q92949 421 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 LRCH3Q96II8 777 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 PRAP1Q96NZ9 151 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 SYT17Q9BSW7 474 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 PPP5D1E7EU14 171 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 AREGP15514 252 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 NDUFA6P56556 154 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 SMOC2Q9H3U7 446 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 GALPQ9UBC7 116 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 SNRNP70P08621 437 aaKnown RBP13.9□□□□□ -0.18
CCDC50-201ENST00000392455 ZNF133P52736 654 aaPredicted RBP13.9□□□□□ -0.18
CCDC50-201ENST00000392455 H3F3AP84243 136 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 ZFAND4Q86XD8 727 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 ENDOVQ8N8Q3 282 aaKnown RBP13.9□□□□□ -0.18
CCDC50-201ENST00000392455 ALG8Q9BVK2 526 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 DENRO43583 198 aaKnown RBP13.9□□□□□ -0.18
CCDC50-201ENST00000392455 IL2RGP31785 369 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 KIR2DL3P43628 341 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 TNK1Q13470 666 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 OLIG2Q13516 323 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 OR5D16Q8NGK9 328 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 GTF2H4Q92759 462 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 MUCL1Q96DR8 90 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 MT-ND4P03905 459 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 CTRB1P17538 263 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 GIPRP48546 466 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 SUMO1P63165 101 aaKnown RBP13.9□□□□□ -0.18
CCDC50-201ENST00000392455 MRPS34P82930 218 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms