RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 NSL1Q96IY1 281 aa6.13□□□□□ -1.43
UBBP1-201ENST00000392399 MRGPRX4Q96LA9 322 aa6.13□□□□□ -1.43
UBBP1-201ENST00000392399 SFXN2Q96NB2 322 aa6.13□□□□□ -1.43
UBBP1-201ENST00000392399 ZNF583Q96ND8 569 aa6.13□□□□□ -1.43
UBBP1-201ENST00000392399 TIMP4Q99727 224 aa6.13□□□□□ -1.43
UBBP1-201ENST00000392399 SLC39A3Q9BRY0 314 aa6.13□□□□□ -1.43
UBBP1-201ENST00000392399 PRDM14Q9GZV8 571 aa6.13□□□□□ -1.43
UBBP1-201ENST00000392399 SLC6A15Q9H2J7 730 aa6.13□□□□□ -1.43
UBBP1-201ENST00000392399 TP63Q9H3D4 680 aaPredicted RBP6.13□□□□□ -1.43
UBBP1-201ENST00000392399 SPAG4Q9NPE6 437 aa6.13□□□□□ -1.43
UBBP1-201ENST00000392399 MED17Q9NVC6 651 aa6.13□□□□□ -1.43
UBBP1-201ENST00000392399 KLHL28Q9NXS3 571 aa6.13□□□□□ -1.43
UBBP1-201ENST00000392399 OSGIN2Q9Y236 505 aa6.13□□□□□ -1.43
UBBP1-201ENST00000392399 SLC5A6Q9Y289 635 aa6.13□□□□□ -1.43
UBBP1-201ENST00000392399 AP4B1Q9Y6B7 739 aa6.13□□□□□ -1.43
UBBP1-201ENST00000392399 TENM4Q6N022 2769 aa6.13□□□□□ -1.43
UBBP1-201ENST00000392399 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 TRGV8A0A0C4DH27 118 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 CENPVL1A0A0U1RR11 272 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 ELOVL7A1L3X0 281 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 CFAP73A6NFT4 308 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 FAM220BPB1ANY3 271 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 B4DXG7 233 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 E9PLN8 166 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 M0QX08 132 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 CYP7B1O75881 506 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 UBOX5O94941 541 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 MFN2O95140 757 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 C8BP07358 591 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 LINGO3P0C6S8 592 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 CALB2P22676 271 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 ME2P23368 584 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 ELK4P28324 431 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 PCGF2P35227 344 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 APOBEC1P41238 236 aaKnown RBP6.12□□□□□ -1.43
UBBP1-201ENST00000392399 HTR3AP46098 478 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 UQCRFS1P47985 274 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 RASSF2P50749 326 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 PER3P56645 1201 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 B3GALT5-AS1P59052 145 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 PSME3P61289 254 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 COPZ1P61923 177 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 RAC1P63000 192 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 EEF1A1P68104 462 aaKnown RBP6.12□□□□□ -1.43
UBBP1-201ENST00000392399 HSF1Q00613 529 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 SELPLGQ14242 412 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 PLPPR5Q32ZL2 321 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 MRPL2Q5T653 305 aaKnown RBP6.12□□□□□ -1.43
UBBP1-201ENST00000392399 RAET1LQ5VY80 246 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 BRICD5Q6PL45 260 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 ARSKQ6UWY0 536 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 C16orf89Q6UX73 402 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 OLIG3Q7RTU3 272 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 FGD2Q7Z6J4 655 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 VRK2Q86Y07 508 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 DOLPP1Q86YN1 238 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 ARMC8Q8IUR7 673 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 ZZZ3Q8IYH5 903 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 PGAM4Q8N0Y7 254 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 ARHGAP24Q8N264 748 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 TMCO5AQ8N6Q1 288 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 OR2T12Q8NG77 320 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 SLC26A7Q8TE54 656 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 PHF10Q8WUB8 498 aaKnown RBP6.12□□□□□ -1.43
UBBP1-201ENST00000392399 CNOT9Q92600 299 aaKnown RBP6.12□□□□□ -1.43
UBBP1-201ENST00000392399 WDYHV1Q96HA8 205 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 VKORC1Q9BQB6 163 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 PINK1Q9BXM7 581 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 UGT2B28Q9BY64 529 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 QRSL1Q9H0R6 528 aaKnown RBP6.12□□□□□ -1.43
UBBP1-201ENST00000392399 C1orf21Q9H246 121 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 SERINC1Q9NRX5 453 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 ACER3Q9NUN7 267 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 ARL8BQ9NVJ2 186 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 CMTM6Q9NX76 183 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 PAQR5Q9NXK6 330 aaPredicted RBP6.12□□□□□ -1.43
UBBP1-201ENST00000392399 DNAJB12Q9NXW2 375 aaKnown RBP6.12□□□□□ -1.43
UBBP1-201ENST00000392399 TMEM181Q9P2C4 612 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 ABCD2Q9UBJ2 740 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 VDAC3Q9Y277 283 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 ZNF443Q9Y2A4 671 aaPredicted RBP6.12□□□□□ -1.43
UBBP1-201ENST00000392399 SLC6A5Q9Y345 797 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 ZNF337Q9Y3M9 751 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 HRH3Q9Y5N1 445 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 LIPGQ9Y5X9 500 aa6.12□□□□□ -1.43
UBBP1-201ENST00000392399 USP9XQ93008 2570 aaPredicted RBP6.12□□□□□ -1.43
UBBP1-201ENST00000392399 HIVEP3Q5T1R4 2406 aa6.11□□□□□ -1.43
UBBP1-201ENST00000392399 CLDN24A6NM45 220 aa6.11□□□□□ -1.43
UBBP1-201ENST00000392399 GJE1A6NN92 205 aa6.11□□□□□ -1.43
UBBP1-201ENST00000392399 C17orf51A8MQB3 221 aa6.11□□□□□ -1.43
UBBP1-201ENST00000392399 B2RBV5 119 aa6.11□□□□□ -1.43
UBBP1-201ENST00000392399 SYT5O00445 386 aa6.11□□□□□ -1.43
UBBP1-201ENST00000392399 CCL21O00585 134 aa6.11□□□□□ -1.43
UBBP1-201ENST00000392399 LRRTM2O43300 516 aa6.11□□□□□ -1.43
UBBP1-201ENST00000392399 OIP5O43482 229 aa6.11□□□□□ -1.43
UBBP1-201ENST00000392399 NTN1O95631 604 aa6.11□□□□□ -1.43
UBBP1-201ENST00000392399 EPPINO95925 133 aa6.11□□□□□ -1.43
UBBP1-201ENST00000392399 GP1BBP13224 206 aa6.11□□□□□ -1.43
UBBP1-201ENST00000392399 ZNF708P17019 499 aa6.11□□□□□ -1.43
UBBP1-201ENST00000392399 PRKCAP17252 672 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms