RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 KDM4EB2RXH2 506 aaPredicted RBP8.96□□□□□ -0.98
COL6A3-204ENST00000392003 H0YGG7 62 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 BET1O15155 118 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 TNFSF14O43557 240 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 CTSVO60911 334 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 SNRNP200O75643 2136 aaKnown RBP8.96□□□□□ -0.98
COL6A3-204ENST00000392003 THBS1P07996 1170 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 GABRG2P18507 467 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 ARF3P61204 181 aaPredicted RBP8.96□□□□□ -0.98
COL6A3-204ENST00000392003 HNRNPA0Q13151 305 aaKnown RBP8.96□□□□□ -0.98
COL6A3-204ENST00000392003 GPR18Q14330 331 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 GARNL3Q5VVW2 1013 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 DESI1Q6ICB0 168 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 ZNF619Q8N2I2 560 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 DEFB119Q8N690 84 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 CLDN22Q8N7P3 220 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 CDRT4Q8N9R6 151 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 SIMC1Q8NDZ2 872 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 OR6F1Q8NGZ6 308 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 GPR151Q8TDV0 419 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 PCNPQ8WW12 178 aaKnown RBP8.96□□□□□ -0.98
COL6A3-204ENST00000392003 RLN3Q8WXF3 142 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 TM4SF19Q96DZ7 209 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 SDF2Q99470 211 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 WNT5BQ9H1J7 359 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 LYRM4Q9HD34 91 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 PRDM9Q9NQV7 894 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 GLTPQ9NZD2 209 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 NTMQ9P121 344 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 C19orf53Q9UNZ5 99 aaPredicted RBP8.96□□□□□ -0.98
COL6A3-204ENST00000392003 MN1Q10571 1320 aaPredicted RBP8.96□□□□□ -0.98
COL6A3-204ENST00000392003 TTLL8A6PVC2 850 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 F8W036 122 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 P2RX6O15547 441 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 AKAP8O43823 692 aaKnown RBP8.96□□□□□ -0.98
COL6A3-204ENST00000392003 PPM1BO75688 479 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 DAB2P98082 770 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 TFF2Q03403 129 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 DUSP8Q13202 625 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 C1orf61Q13536 156 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 TPBGQ13641 420 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 ZFP69Q49AA0 526 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 PDZK1Q5T2W1 519 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 CCNJQ5T5M9 372 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 FAM131AQ6UXB0 335 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 ZNF836Q6ZNA1 936 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 SHFQ7M4L6 423 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 MRGPREQ86SM8 312 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 FRMD1Q8N878 549 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 SAMD8Q96LT4 415 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 TPSD1Q9BZJ3 242 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 HRASLS2Q9NWW9 162 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 ATXN7L1Q9ULK2 861 aaPredicted RBP8.96□□□□□ -0.98
COL6A3-204ENST00000392003 CA14Q9ULX7 337 aa8.96□□□□□ -0.98
COL6A3-204ENST00000392003 IQCMA0A1B0GVH7 501 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 PLD2O14939 933 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 SSX4O60224 188 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 AK1P00568 194 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 SMIM10L1P0DMW3 83 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 GCGRP47871 477 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 BNC1Q01954 994 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 SCRN3Q0VDG4 424 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 ALG11Q2TAA5 492 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 DCST2Q5T1A1 773 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 DDI2Q5TDH0 399 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 HSDL2Q6YN16 418 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 ZNF620Q6ZNG0 422 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 Q6ZS52 159 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 SETD6Q8TBK2 473 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 DOK4Q8TEW6 326 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 TMEM255BQ8WV15 326 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 SMIM10Q96HG1 83 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 DIRAS2Q96HU8 199 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 CD180Q99467 661 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 GSDMCQ9BYG8 508 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 CAPN10Q9HC96 672 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 TRAPPC4Q9Y296 219 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 DTX4Q9Y2E6 619 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 UNC119BA6NIH7 251 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 PRAMEF26H0Y7S4 382 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 CASKO14936 926 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 OR10H2O60403 315 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 GPR75O95800 540 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 AZGP1P25311 298 aaKnown RBP8.95□□□□□ -0.98
COL6A3-204ENST00000392003 SLC1A3P43003 542 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 RABIFP47224 123 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 RFX3P48380 749 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 SSTP61278 116 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 PSPHP78330 225 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 EFNB1P98172 346 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 TRMT12Q53H54 448 aaKnown RBP8.95□□□□□ -0.98
COL6A3-204ENST00000392003 FCRL6Q6DN72 434 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 TMEM81Q6P7N7 255 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 GID4Q8IVV7 300 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 ZNF614Q8N883 585 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 OR13H1Q8NG92 308 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 SLC25A46Q96AG3 418 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 SPACA7Q96KW9 195 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 SNX18Q96RF0 628 aa8.95□□□□□ -0.98
COL6A3-204ENST00000392003 BEX2Q9BXY8 128 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms