RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 CSO75390 466 aaKnown RBP18.48■□□□□ 0.55
SHANK1-203ENST00000391813 GAAP10253 952 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 ERVFC1P60507 584 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 SNRPGP62308 76 aaKnown RBP18.48■□□□□ 0.55
SHANK1-203ENST00000391813 MVB12BQ9H7P6 319 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 ARSAP15289 507 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 CD79BP40259 229 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 CXADRP78310 365 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 NTHL1P78549 312 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 BOLLQ8N9W6 283 aaKnown RBP18.47■□□□□ 0.55
SHANK1-203ENST00000391813 WDR92Q96MX6 357 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 IL17FQ96PD4 163 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 OR52D1Q9H346 318 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 ATP13A2Q9NQ11 1180 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 SLC7A7Q9UM01 511 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 MAST2Q6P0Q8 1798 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 H3BQ06 376 aaPredicted RBP18.47■□□□□ 0.55
SHANK1-203ENST00000391813 B4GALT2O60909 372 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 RAF1P04049 648 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 TGM4P49221 684 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 SIGIRRQ6IA17 410 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 SFXN4Q6P4A7 337 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 MFSD6LQ8IWD5 586 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 LNX2Q8N448 690 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 SFXN5Q8TD22 340 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 PCNPQ8WW12 178 aaKnown RBP18.47■□□□□ 0.55
SHANK1-203ENST00000391813 HLA-CQ95604 372 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 PCDHGA6Q9Y5G7 932 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 C11orf98E9PRG8 122 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 GFRA2O00451 464 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 LEXMQ3ZCV2 418 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 CRTC1Q6UUV9 634 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 LMX1AQ8TE12 382 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 ST8SIA4Q92187 359 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 MS4A4EQ96PG1 132 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 SPIN2AQ99865 258 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 SPIN2BQ9BPZ2 258 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 CDCA4Q9BXL8 241 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 ASIC5Q9NY37 505 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 TAS2R16Q9NYV7 291 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 NPFFR2Q9Y5X5 522 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 HCFC2Q9Y5Z7 792 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 CHATP28329 748 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 P2RX3P56373 397 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 HBA1P69905 142 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 RPL22L1Q6P5R6 122 aaKnown RBP18.47■□□□□ 0.55
SHANK1-203ENST00000391813 MBOAT4Q96T53 435 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 QRSL1Q9H0R6 528 aaKnown RBP18.47■□□□□ 0.55
SHANK1-203ENST00000391813 GABARAPL1Q9H0R8 117 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 SDHAF2Q9NX18 166 aa18.47■□□□□ 0.55
SHANK1-203ENST00000391813 DRGXA6NNA5 263 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 SNRNP70P08621 437 aaKnown RBP18.46■□□□□ 0.55
SHANK1-203ENST00000391813 CLUP10909 449 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 DLEU7Q6UYE1 221 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 RABEPKQ7Z6M1 372 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 PRSS58Q8IYP2 241 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 STEAP2Q8NFT2 490 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 CLSTN3Q9BQT9 956 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 EVA1AQ9H8M9 152 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 CA14Q9ULX7 337 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 DIRAS3O95661 229 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 ATXN1LP0C7T5 689 aaKnown RBP18.46■□□□□ 0.55
SHANK1-203ENST00000391813 DSC1Q08554 894 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 MBTPS1Q14703 1052 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 XKR7Q5GH72 579 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 SCD5Q86SK9 330 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 KLHDC8AQ8IYD2 350 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 GPR78Q96P69 363 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 ZNF576Q9H609 170 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 TUBAL3A6NHL2 446 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 FADS1O60427 444 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 RPS2P15880 293 aaKnown RBP18.46■□□□□ 0.55
SHANK1-203ENST00000391813 SGSHP51688 502 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 ZER1Q7Z7L7 766 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 LUZP4Q9P127 313 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 SNX11Q9Y5W9 270 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 AHRP35869 848 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 TM9SF4Q92544 642 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 PHYHIPQ92561 330 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 NXPE3Q969Y0 559 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 YIPF6Q96EC8 236 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 OR2M4Q96R27 311 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 C1GALT1Q9NS00 363 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 MAN2C1Q9NTJ4 1040 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 LRFN1Q9P244 771 aa18.46■□□□□ 0.55
SHANK1-203ENST00000391813 FAM230AA0A1W2PPH8 454 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 TPPPO94811 219 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 TACR1P25103 407 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 IL20RBQ6UXL0 311 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 ZNF704Q6ZNC4 412 aaPredicted RBP18.45■□□□□ 0.54
SHANK1-203ENST00000391813 SGPP2Q8IWX5 399 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 CPXM2Q8N436 756 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 OR51L1Q8NGJ5 315 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 OR52N1Q8NH53 320 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 UBTD2Q8WUN7 234 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 ZNF850A8MQ14 1090 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 RPS15AP62244 130 aaKnown RBP18.45■□□□□ 0.54
SHANK1-203ENST00000391813 AQP6Q13520 282 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 ZC3H14Q6PJT7 736 aaKnown RBP18.45■□□□□ 0.54
SHANK1-203ENST00000391813 SIAH3Q8IW03 269 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms