RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 DNAJA3Q96EY1 480 aa10.35□□□□□ -0.75
SOD1-202ENST00000389995 C16orf58Q96GQ5 468 aa10.35□□□□□ -0.75
SOD1-202ENST00000389995 PAFAH2Q99487 392 aa10.35□□□□□ -0.75
SOD1-202ENST00000389995 BPESC1Q9GZL8 116 aa10.35□□□□□ -0.75
SOD1-202ENST00000389995 GP6Q9HCN6 339 aa10.35□□□□□ -0.75
SOD1-202ENST00000389995 MIEF1Q9NQG6 463 aa10.35□□□□□ -0.75
SOD1-202ENST00000389995 GIN1Q9NXP7 522 aa10.35□□□□□ -0.75
SOD1-202ENST00000389995 KLHL9Q9P2J3 617 aa10.35□□□□□ -0.75
SOD1-202ENST00000389995 NFU1Q9UMS0 254 aa10.35□□□□□ -0.75
SOD1-202ENST00000389995 MGAT4BQ9UQ53 548 aa10.35□□□□□ -0.75
SOD1-202ENST00000389995 PMF1-BGLAPU3KQ54 211 aa10.35□□□□□ -0.75
SOD1-202ENST00000389995 A0A087WUV0 522 aaPredicted RBP10.34□□□□□ -0.75
SOD1-202ENST00000389995 ATP6V1G2-DDX39BF2Z307 99 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 SCDO00767 359 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 RGS14O43566 566 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 ULK1O75385 1050 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 NKX2-2O95096 273 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 SLU7O95391 586 aaKnown RBP10.34□□□□□ -0.75
SOD1-202ENST00000389995 KRT6AP02538 564 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 KRT6BP04259 564 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 RBP1P09455 135 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 PRPS2P11908 318 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 HSD3B1P14060 373 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 HPGDP15428 266 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 ZNF23P17027 643 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 HSD3B2P26439 372 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 ECHS1P30084 290 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 HMOX2P30519 316 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 NTSP30990 170 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 MAP3K8P41279 467 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 EIF1P41567 113 aaKnown RBP10.34□□□□□ -0.75
SOD1-202ENST00000389995 KRT6CP48668 564 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 SERPINB9P50453 376 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 ZNF763Q0D2J5 394 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 DUSP5Q16690 384 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 UNC50Q53HI1 259 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 ARL13AQ5H913 290 aaPredicted RBP10.34□□□□□ -0.75
SOD1-202ENST00000389995 SPDYAQ5MJ70 313 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 TEX35Q5T0J7 233 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 C9orf135Q5VTT2 229 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 FAM71E1Q6IPT2 247 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 ZNF544Q6NX49 715 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 KLHL17Q6TDP4 642 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 RINLQ6ZS11 566 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 P2RY8Q86VZ1 359 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 SLC43A2Q8N370 569 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 C3orf56Q8N813 242 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 SLC16A11Q8NCK7 471 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 PHOSPHO1Q8TCT1 267 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 CIDECQ96AQ7 238 aaPredicted RBP10.34□□□□□ -0.75
SOD1-202ENST00000389995 VRK1Q99986 396 aaPredicted RBP10.34□□□□□ -0.75
SOD1-202ENST00000389995 RHOXF2Q9BQY4 288 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 TRMOQ9BU70 441 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 FUT8Q9BYC5 575 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 BHLHE41Q9C0J9 482 aaPredicted RBP10.34□□□□□ -0.75
SOD1-202ENST00000389995 MYNNQ9NPC7 610 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 NTMQ9P121 344 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 TMEFF2Q9UIK5 374 aaPredicted RBP10.34□□□□□ -0.75
SOD1-202ENST00000389995 CARD8Q9Y2G2 431 aa10.34□□□□□ -0.75
SOD1-202ENST00000389995 POLR3HQ9Y535 204 aaPredicted RBP10.34□□□□□ -0.75
SOD1-202ENST00000389995 CMYA5Q8N3K9 4069 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 EXOC1LA0A1B0GW35 172 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 CYTIPO60759 359 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 SUPT7LO94864 414 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 H6PDO95479 791 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 NGFRP08138 427 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 ELK4P28324 431 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 SLC7A1P30825 629 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 APOBEC3AP31941 199 aaPredicted RBP10.33□□□□□ -0.76
SOD1-202ENST00000389995 NTF4P34130 210 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 ACTG1P63261 375 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 SLC25A3Q00325 362 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 MLC1Q15049 377 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 RASA2Q15283 850 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 SWI5Q1ZZU3 235 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 GALNT18Q6P9A2 607 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 GPRIN3Q6ZVF9 776 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 GALNT5Q7Z7M9 940 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 TMEM151AQ8N4L1 468 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 WDR31Q8NA23 367 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 NUP43Q8NFH3 380 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 SEMA6DQ8NFY4 1073 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 RFWD2Q8NHY2 731 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.33□□□□□ -0.761e-33■□□□□ 8.3
SOD1-202ENST00000389995 HOXB13Q92826 284 aaPredicted RBP10.33□□□□□ -0.76
SOD1-202ENST00000389995 GIMAP5Q96F15 307 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 EGLN2Q96KS0 407 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 OR5B2Q96R09 309 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 UBQLN4Q9NRR5 601 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 GRID1Q9ULK0 1009 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 TMCO1Q9UM00 188 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 FKBP7Q9Y680 259 aa10.33□□□□□ -0.76
SOD1-202ENST00000389995 PRKDCP78527 4128 aaKnown RBP10.33□□□□□ -0.76
SOD1-202ENST00000389995 LOC390937A0A1W2PQ73 354 aa10.32□□□□□ -0.76
SOD1-202ENST00000389995 GJE1A6NN92 205 aa10.32□□□□□ -0.76
SOD1-202ENST00000389995 TRIM49D1C9J1S8 452 aa10.32□□□□□ -0.76
SOD1-202ENST00000389995 NDUFS8O00217 210 aa10.32□□□□□ -0.76
SOD1-202ENST00000389995 SLITRK5O94991 958 aa10.32□□□□□ -0.76
SOD1-202ENST00000389995 BMP4P12644 408 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms