RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 SMIM6P0DI80 62 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 MPC1LP0DKB6 136 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 SELLP14151 372 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 CDKN3Q16667 212 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 Q3ZCU0 254 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 CCDC157Q569K6 752 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 ARL9Q6T311 187 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 SLC16A13Q7RTY0 426 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 PXKQ7Z7A4 578 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 SERPINA12Q8IW75 414 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 HMGB4Q8WW32 186 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 CLP1Q92989 425 aaKnown RBP13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 TMEM169Q96HH4 297 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 GPN1Q9HCN4 374 aaPredicted RBP13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 KLHL1Q9NR64 748 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 SPHK1Q9NYA1 384 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 MYO9BQ13459 2157 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 SURF4O15260 269 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 ST8SIA5O15466 376 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 GATCO43716 136 aaKnown RBP13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 PREPP48147 710 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 DLX5P56178 289 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 H2BFSP57053 126 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 TAS2R50P59544 299 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 TMEM44Q2T9K0 475 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 ELP2Q6IA86 826 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 C5orf46Q6UWT4 87 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 APOOLQ6UXV4 268 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 MOB3CQ70IA8 216 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 OR5W2Q8NH69 310 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 C2CD4CQ8TF44 421 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 C2orf15Q8WU43 125 aaKnown RBP13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 BADQ92934 168 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 NEURL3Q96EH8 262 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 FCRL4Q96PJ5 515 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 UTP23Q9BRU9 249 aaKnown RBP13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 PTDSS2Q9BVG9 487 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 KLF16Q9BXK1 252 aaPredicted RBP13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 ZDHHC3Q9NYG2 299 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 ABRACLQ9P1F3 81 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 MYEF2Q9P2K5 600 aaKnown RBP13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 CLEC4EQ9ULY5 219 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 PCDHGA5Q9Y5G8 931 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 ASGR2P07307 311 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 SPAM1P38567 509 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 RPL3P39023 403 aaKnown RBP13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 C2orf68Q2NKX9 166 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 IER5LQ5T953 404 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 DHRS7BQ6IAN0 325 aaPredicted RBP13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 OR7E24Q6IFN5 339 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 ZNF613Q6PF04 617 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 TPGS1Q6ZTW0 290 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 TBC1D19Q8N5T2 526 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 OR4Q3Q8NH05 313 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 SLC22A11Q9NSA0 550 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 CXXC1Q9P0U4 656 aaPredicted RBP13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 E9PI62 339 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 NEDD8-MDP1E9PL57 170 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 GREM1O60565 184 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 SC5DO75845 299 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 MAPK3P27361 379 aaPredicted RBP13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 ACADLP28330 430 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 OC90Q02509 493 aaPredicted RBP13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 NAE1Q13564 534 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 GUCA2BQ16661 112 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 PAN3Q58A45 887 aaKnown RBP13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 FAM180BQ6P0A1 224 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 ZNF783Q6ZMS7 281 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 SVBPQ8N300 66 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 ACBD7Q8N6N7 88 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 TMIEQ8NEW7 156 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 OR5M1Q8NGP8 315 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 OR14A16Q8NHC5 309 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 MRPL48Q96GC5 212 aaKnown RBP13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 ZNF607Q96SK3 696 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 PDCD10Q9BUL8 212 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 ALG8Q9BVK2 526 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 PBX4Q9BYU1 374 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 SLC6A16Q9GZN6 736 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 OR51I1Q9H343 314 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 MYNNQ9NPC7 610 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 KLF15Q9UIH9 416 aa13.63□□□□□ -0.23
VPS9D1-201ENST00000389386 A0A087WUU8 490 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 RAB19A4D1S5 217 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 SOCS6O14544 535 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 ABLIM3O94929 683 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 CRYBA1P05813 215 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 CD53P19397 219 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 CNR1P21554 472 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 FNTBP49356 437 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 DCDP81605 110 aaKnown RBP13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 PRAMEF13Q5VWM6 474 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 MMP21Q8N119 569 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 OR51G2Q8NGK0 314 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 OR52I2Q8NH67 350 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 IRAK3Q9Y616 596 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 SULT1C2O00338 296 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 SAP18O00422 153 aaKnown RBP13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 EIF4E2O60573 245 aaKnown RBP13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 SOD2P04179 222 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms