RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 PLA2G7Q13093 441 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 PAFAH1B3Q15102 231 aaKnown RBP5.53□□□□□ -1.52
RFX3-204ENST00000382004 EBPQ15125 230 aaKnown RBP5.53□□□□□ -1.52
RFX3-204ENST00000382004 VASNQ6EMK4 673 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 CLEC1AQ8NC01 280 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 ZNF417Q8TAU3 575 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 ZNF689Q96CS4 500 aaPredicted RBP5.53□□□□□ -1.52
RFX3-204ENST00000382004 ZNF486Q96H40 463 aaPredicted RBP5.53□□□□□ -1.52
RFX3-204ENST00000382004 TSSK2Q96PF2 358 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 INTS14Q96SY0 518 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 CMSS1Q9BQ75 279 aaKnown RBP5.53□□□□□ -1.52
RFX3-204ENST00000382004 RNF39Q9H2S5 420 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 MAGIXQ9H6Y5 334 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 ARL2-SNX15V9GYD0 113 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 RNF212BA8MTL3 300 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 BMP1P13497 986 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 RPA2P15927 270 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 GGT1P19440 569 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 DNAJB1P25685 340 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 WNT4P56705 351 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 FAM69AQ5T7M9 428 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 PRICKLE2Q7Z3G6 844 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 C14orf80Q86SX3 495 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 C15orf54Q8N8G6 183 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 C4orf32Q8N8J7 132 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 OR6T1Q8NGN1 323 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 BIRC8Q96P09 236 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 UBL7Q96S82 380 aaPredicted RBP5.53□□□□□ -1.52
RFX3-204ENST00000382004 STEAP1Q9UHE8 339 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 NFKBIEO00221 500 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 UPK1BO75841 260 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 HOXC8P31273 242 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 LMAN2Q12907 356 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 SF3B4Q15427 424 aaKnown RBP eCLIP5.52□□□□□ -1.53
RFX3-204ENST00000382004 RBMS3Q6XE24 437 aaKnown RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 SSX7Q7RTT5 188 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 C4orf36Q96KX1 117 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 LURAP1Q96LR2 239 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 BCL7BQ9BQE9 202 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 BOCQ9BWV1 1114 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 CPEB1Q9BZB8 566 aaKnown RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 NOX3Q9HBY0 568 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 ADGRB3O60242 1522 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 KDM4EB2RXH2 506 aaPredicted RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 PFKMP08237 780 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 OSMP13725 252 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 FUT1P19526 365 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 OPRL1P41146 370 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 GABARAPL2P60520 117 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 SORDQ00796 357 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 UPP1Q16831 310 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 Q1RN00 199 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 METAP1DQ6UB28 335 aaPredicted RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 GTF2H5Q6ZYL4 71 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 OR4K5Q8NGD3 323 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 OR8J2Q8NGG1 315 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 SLC7A13Q8TCU3 470 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 FCRL3Q96P31 734 aaPredicted RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 ZNF587Q96SQ5 575 aaPredicted RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 RTP3Q9BQQ7 232 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 STARD5Q9NSY2 213 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 NAP1L6A6NFF2 107 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 GAPDHSO14556 408 aaPredicted RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 GYPBP06028 91 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 PROS1P07225 676 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 DHRS4L1P0CG22 281 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 FOLR1P15328 257 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 TGFBR3Q03167 851 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 GALNT2Q10471 571 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 CLINT1Q14677 625 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 ACSM3Q53FZ2 586 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 ZNF551Q7Z340 670 aaPredicted RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 GCNT2Q8N0V5 402 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 SLC5A8Q8N695 610 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 SECTM1Q8WVN6 248 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 INPP5KQ9BT40 448 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 MRIQ9BWK5 157 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 SGPP1Q9BX95 441 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 ARV1Q9H2C2 271 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 NMNAT1Q9HAN9 279 aaPredicted RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 INIPQ9NRY2 104 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 QPCTLQ9NXS2 382 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 GNG12Q9UBI6 72 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 MAGI3Q5TCQ9 1506 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 RFXAPO00287 272 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 CNIH1O95406 144 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 MPC1LP0DKB6 136 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 PTTG1IPP53801 180 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 TLE4Q04727 773 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 DSC1Q08554 894 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 DMWDQ09019 674 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 SLC35G1Q2M3R5 365 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 OR5M10Q6IEU7 315 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 APOOLQ6UXV4 268 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 LBX2Q6XYB7 198 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 FAM57BQ71RH2 274 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 PRSS48Q7RTY5 328 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 PLPP5Q8NEB5 264 aa5.52□□□□□ -1.53
RFX3-204ENST00000382004 BRIX1Q8TDN6 353 aaKnown RBP5.52□□□□□ -1.53
RFX3-204ENST00000382004 ZFAND2BQ8WV99 257 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms