RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 KLHL15Q96M94 604 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 KLF15Q9UIH9 416 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 BOLA1Q9Y3E2 137 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 PCDHGA6Q9Y5G7 932 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 ARPC1BO15143 372 aaKnown RBP16.03■□□□□ 0.16
SGCB-201ENST00000381431 APOC1P02654 83 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 BMP1P13497 986 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 CSNK1G2P78368 415 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 TMEM205Q6UW68 189 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 Q6ZNX1 250 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 ZNF765Q7L2R6 523 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 NPRL2Q8WTW4 380 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 HHIPQ96QV1 700 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 SLC6A17Q9H1V8 727 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 SCML1Q9UN30 329 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 SLC35A3Q9Y2D2 325 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 YARS2Q9Y2Z4 477 aaKnown RBP16.03■□□□□ 0.16
SGCB-201ENST00000381431 M0R036 132 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 ZNF806P0C7X5 589 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 TLE3Q04726 772 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 CELF2-AS1Q8N7Q2 184 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 C2orf42Q9NWW7 574 aa16.03■□□□□ 0.16
SGCB-201ENST00000381431 SLC5A10A0PJK1 596 aa16.02■□□□□ 0.16
SGCB-201ENST00000381431 PRAMEF26H0Y7S4 382 aa16.02■□□□□ 0.16
SGCB-201ENST00000381431 GFYI3L273 518 aa16.02■□□□□ 0.16
SGCB-201ENST00000381431 IGFBP1P08833 259 aaPredicted RBP16.02■□□□□ 0.16
SGCB-201ENST00000381431 OR1D4P47884 311 aa16.02■□□□□ 0.16
SGCB-201ENST00000381431 MAT1AQ00266 395 aaKnown RBP16.02■□□□□ 0.16
SGCB-201ENST00000381431 CHRFAM7AQ494W8 412 aa16.02■□□□□ 0.16
SGCB-201ENST00000381431 HOXD1Q9GZZ0 328 aa16.02■□□□□ 0.16
SGCB-201ENST00000381431 TXNL4BQ9NX01 149 aaKnown RBP16.02■□□□□ 0.16
SGCB-201ENST00000381431 HMX3A6NHT5 357 aa16.02■□□□□ 0.16
SGCB-201ENST00000381431 UQCRC1P31930 480 aa16.02■□□□□ 0.16
SGCB-201ENST00000381431 HOXD12P35452 270 aa16.02■□□□□ 0.16
SGCB-201ENST00000381431 CYHR1Q6ZMK1 362 aa16.02■□□□□ 0.16
SGCB-201ENST00000381431 TNFRSF13CQ96RJ3 184 aa16.02■□□□□ 0.16
SGCB-201ENST00000381431 C1QTNF3Q9BXJ4 246 aa16.02■□□□□ 0.16
SGCB-201ENST00000381431 SIDT1Q9NXL6 827 aaKnown RBP16.02■□□□□ 0.16
SGCB-201ENST00000381431 SLC39A1Q9NY26 324 aa16.02■□□□□ 0.16
SGCB-201ENST00000381431 SOCS6O14544 535 aa16.02■□□□□ 0.15
SGCB-201ENST00000381431 FARS2O95363 451 aaKnown RBP16.02■□□□□ 0.15
SGCB-201ENST00000381431 IL33O95760 270 aa16.02■□□□□ 0.15
SGCB-201ENST00000381431 ZNF16P17020 682 aaPredicted RBP16.02■□□□□ 0.15
SGCB-201ENST00000381431 AMY2BP19961 511 aa16.02■□□□□ 0.15
SGCB-201ENST00000381431 LSSP48449 732 aa16.02■□□□□ 0.15
SGCB-201ENST00000381431 CLDN12P56749 244 aa16.02■□□□□ 0.15
SGCB-201ENST00000381431 EEF1A1P5Q5VTE0 462 aa16.02■□□□□ 0.15
SGCB-201ENST00000381431 CFAP77Q6ZQR2 320 aa16.02■□□□□ 0.15
SGCB-201ENST00000381431 SFXN5Q8TD22 340 aa16.02■□□□□ 0.15
SGCB-201ENST00000381431 OR51J1Q9H342 316 aa16.02■□□□□ 0.15
SGCB-201ENST00000381431 RANGRFQ9HD47 186 aaPredicted RBP16.02■□□□□ 0.15
SGCB-201ENST00000381431 ADAM29Q9UKF5 820 aa16.02■□□□□ 0.15
SGCB-201ENST00000381431 PRELID1Q9Y255 219 aa16.02■□□□□ 0.15
SGCB-201ENST00000381431 ACOD1A6NK06 481 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 TMX2-CTNND1H3BSU7 103 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 JUNBP17275 347 aaPredicted RBP16.01■□□□□ 0.15
SGCB-201ENST00000381431 UGT2B10P36537 528 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 CRMP1Q14194 572 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 PRAMEF8Q5VWM4 474 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 PRAMEF7Q5VXH5 474 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 SPPL3Q8TCT6 385 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 C8orf33Q9H7E9 229 aaPredicted RBP16.01■□□□□ 0.15
SGCB-201ENST00000381431 FBRSQ9HAH7 460 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 RARRES3Q9UL19 164 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 RFXAPO00287 272 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 AQP9O43315 295 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 SLC16A7O60669 478 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 UBL4AP11441 157 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 MMP11P24347 488 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 IDUAP35475 653 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 TGFBR1P36897 503 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 SNU13P55769 128 aaKnown RBP16.01■□□□□ 0.15
SGCB-201ENST00000381431 P2RY14Q15391 338 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 TMEM179BQ7Z7N9 219 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 SNAPC3Q92966 411 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 COQ10AQ96MF6 247 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 ZNF582Q96NG8 517 aaPredicted RBP16.01■□□□□ 0.15
SGCB-201ENST00000381431 KIR2DS5A0A0G2JLQ3 304 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 A0A0G2JNG1 304 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 KIR2DS3K7RE56 304 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 C1QAP02745 245 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 TFP02787 698 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 DRD1P21728 446 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 SHC1P29353 583 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 NFATC4Q14934 902 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 KIR2DS5Q14953 304 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 ZNF385BQ569K4 471 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 ELP5Q8TE02 316 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 ARSGQ96EG1 525 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 ZC3H10Q96K80 434 aaKnown RBP16.01■□□□□ 0.15
SGCB-201ENST00000381431 FAM71F1Q96KD3 344 aaPredicted RBP16.01■□□□□ 0.15
SGCB-201ENST00000381431 RHNO1Q9BSD3 238 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 TMEM38AQ9H6F2 299 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 B3GAT2Q9NPZ5 323 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 TAS2R8Q9NYW2 309 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 MT-ND4P03905 459 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 LIPCP11150 499 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 SLC6A12P48065 614 aa16.01■□□□□ 0.15
SGCB-201ENST00000381431 GP2P55259 537 aaKnown RBP16.01■□□□□ 0.15
SGCB-201ENST00000381431 LRRC56Q8IYG6 542 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms