RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 CMC2Q9NRP2 79 aa21.31■■□□□ 1
VPS16-201ENST00000380443 K7ESF4 209 aa21.3■■□□□ 1
VPS16-201ENST00000380443 LIMS3P0CW19 117 aa21.3■■□□□ 1
VPS16-201ENST00000380443 LIMS4P0CW20 117 aa21.3■■□□□ 1
VPS16-201ENST00000380443 BCKDHBP21953 392 aa21.3■■□□□ 1
VPS16-201ENST00000380443 SLC1A3P43003 542 aa21.3■■□□□ 1
VPS16-201ENST00000380443 PGDP52209 483 aa21.3■■□□□ 1
VPS16-201ENST00000380443 OR1D5P58170 312 aa21.3■■□□□ 1
VPS16-201ENST00000380443 RPS3AP61247 264 aaKnown RBP21.3■■□□□ 1
VPS16-201ENST00000380443 SOWAHCQ53LP3 525 aaPredicted RBP21.3■■□□□ 1
VPS16-201ENST00000380443 ALG10BQ5I7T1 473 aa21.3■■□□□ 1
VPS16-201ENST00000380443 NKAIN2Q5VXU1 208 aa21.3■■□□□ 1
VPS16-201ENST00000380443 RTL4Q6ZR62 310 aa21.3■■□□□ 1
VPS16-201ENST00000380443 KLHL36Q8N4N3 616 aa21.3■■□□□ 1
VPS16-201ENST00000380443 PTCHD1Q96NR3 888 aa21.3■■□□□ 1
VPS16-201ENST00000380443 NUAK2Q9H093 628 aa21.3■■□□□ 1
VPS16-201ENST00000380443 C20orf141Q9NUB4 165 aa21.3■■□□□ 1
VPS16-201ENST00000380443 MRTO4Q9UKD2 239 aaKnown RBP21.3■■□□□ 1
VPS16-201ENST00000380443 DTX4Q9Y2E6 619 aa21.3■■□□□ 1
VPS16-201ENST00000380443 UGT2A1Q9Y4X1 527 aa21.3■■□□□ 1
VPS16-201ENST00000380443 TMEM184BQ9Y519 407 aaPredicted RBP21.3■■□□□ 1
VPS16-201ENST00000380443 SAGP10523 405 aaPredicted RBP21.29■■□□□ 1
VPS16-201ENST00000380443 PPICP45877 212 aa21.29■■□□□ 1
VPS16-201ENST00000380443 DOC2BQ14184 412 aa21.29■■□□□ 1
VPS16-201ENST00000380443 LIPKQ5VXJ0 399 aa21.29■■□□□ 1
VPS16-201ENST00000380443 WDR74Q6RFH5 385 aaPredicted RBP21.29■■□□□ 1
VPS16-201ENST00000380443 MEPCEQ7L2J0 689 aaKnown RBP21.29■■□□□ 1
VPS16-201ENST00000380443 CPOQ8IVL8 374 aa21.29■■□□□ 1
VPS16-201ENST00000380443 ZNF527Q8NB42 609 aa21.29■■□□□ 1
VPS16-201ENST00000380443 GALNT6Q8NCL4 622 aa21.29■■□□□ 1
VPS16-201ENST00000380443 SLC41A2Q96JW4 573 aa21.29■■□□□ 1
VPS16-201ENST00000380443 RNF167Q9H6Y7 350 aa21.29■■□□□ 1
VPS16-201ENST00000380443 ATP13A2Q9NQ11 1180 aa21.29■■□□□ 1
VPS16-201ENST00000380443 MEPEQ9NQ76 525 aaPredicted RBP21.29■■□□□ 1
VPS16-201ENST00000380443 HINT3Q9NQE9 182 aaKnown RBP21.29■■□□□ 1
VPS16-201ENST00000380443 INPP5EQ9NRR6 644 aa21.29■■□□□ 1
VPS16-201ENST00000380443 SPIN1Q9Y657 262 aaPredicted RBP21.29■■□□□ 1
VPS16-201ENST00000380443 hCG_2014768A0A024R1R8 64 aa21.29■■□□□ 1
VPS16-201ENST00000380443 C17orf105B2RV13 164 aa21.29■■□□□ 1
VPS16-201ENST00000380443 PPM1BO75688 479 aa21.29■■□□□ 1
VPS16-201ENST00000380443 IL1AP01583 271 aa21.29■■□□□ 1
VPS16-201ENST00000380443 CLPSP04118 112 aa21.29■■□□□ 1
VPS16-201ENST00000380443 GAAP10253 952 aa21.29■■□□□ 1
VPS16-201ENST00000380443 RORCP51449 518 aa21.29■■□□□ 1
VPS16-201ENST00000380443 FXYD6P3P58550 94 aa21.29■■□□□ 1
VPS16-201ENST00000380443 MAMSTRQ6ZN01 415 aa21.29■■□□□ 1
VPS16-201ENST00000380443 C11orf74Q86VG3 221 aa21.29■■□□□ 1
VPS16-201ENST00000380443 GPR135Q8IZ08 494 aa21.29■■□□□ 1
VPS16-201ENST00000380443 ZNF485Q8NCK3 441 aa21.29■■□□□ 1
VPS16-201ENST00000380443 GRHL3Q8TE85 626 aa21.29■■□□□ 1
VPS16-201ENST00000380443 SENP5Q96HI0 755 aaPredicted RBP21.29■■□□□ 1
VPS16-201ENST00000380443 TNFRSF10DQ9UBN6 386 aa21.29■■□□□ 1
VPS16-201ENST00000380443 CARD8Q9Y2G2 431 aa21.29■■□□□ 1
VPS16-201ENST00000380443 SLC30A4O14863 429 aa21.28■■□□□ 1
VPS16-201ENST00000380443 CSTAP01040 98 aa21.28■■□□□ 1
VPS16-201ENST00000380443 PAICSP22234 425 aaKnown RBP21.28■■□□□ 1
VPS16-201ENST00000380443 SLC6A6P31641 620 aa21.28■■□□□ 1
VPS16-201ENST00000380443 RORAP35398 523 aa21.28■■□□□ 1
VPS16-201ENST00000380443 SLC9A3P48764 834 aa21.28■■□□□ 1
VPS16-201ENST00000380443 DCAF7P61962 342 aa21.28■■□□□ 1
VPS16-201ENST00000380443 BDH1Q02338 343 aa21.28■■□□□ 1
VPS16-201ENST00000380443 OXA1LQ15070 435 aa21.28■■□□□ 1
VPS16-201ENST00000380443 ZNF181Q2M3W8 571 aa21.28■■□□□ 1
VPS16-201ENST00000380443 TRIM16LQ309B1 348 aa21.28■■□□□ 1
VPS16-201ENST00000380443 KLHL26Q53HC5 615 aa21.28■■□□□ 1
VPS16-201ENST00000380443 TTLL10Q6ZVT0 673 aa21.28■■□□□ 1
VPS16-201ENST00000380443 ABTB1Q969K4 478 aaPredicted RBP21.28■■□□□ 1
VPS16-201ENST00000380443 ART5Q96L15 291 aa21.28■■□□□ 1
VPS16-201ENST00000380443 PRRX2Q99811 253 aa21.28■■□□□ 1
VPS16-201ENST00000380443 NDC1Q9BTX1 674 aa21.28■■□□□ 1
VPS16-201ENST00000380443 MED18Q9BUE0 208 aa21.28■■□□□ 1
VPS16-201ENST00000380443 MKKSQ9NPJ1 570 aaPredicted RBP21.28■■□□□ 1
VPS16-201ENST00000380443 SERTAD3Q9UJW9 196 aa21.28■■□□□ 1
VPS16-201ENST00000380443 IGKV3D-11A0A0A0MRZ8 115 aa21.27■■□□□ 1
VPS16-201ENST00000380443 CCDC163A0A0D9SF12 145 aa21.27■■□□□ 1
VPS16-201ENST00000380443 SLC22A31A6NKX4 558 aa21.27■■□□□ 1
VPS16-201ENST00000380443 AKAP8O43823 692 aaKnown RBP21.27■■□□□ 1
VPS16-201ENST00000380443 IGF2P01344 180 aa21.27■■□□□ 1
VPS16-201ENST00000380443 GABRA5P31644 462 aa21.27■■□□□ 1
VPS16-201ENST00000380443 ATP6V1E1P36543 226 aa21.27■■□□□ 1
VPS16-201ENST00000380443 CAPZA2P47755 286 aa21.27■■□□□ 1
VPS16-201ENST00000380443 FOXK2Q01167 660 aa21.27■■□□□ 1
VPS16-201ENST00000380443 NIPAL3Q6P499 406 aa21.27■■□□□ 1
VPS16-201ENST00000380443 BTLAQ7Z6A9 289 aa21.27■■□□□ 1
VPS16-201ENST00000380443 SLC35F3Q8IY50 421 aa21.27■■□□□ 1
VPS16-201ENST00000380443 CACTIN-AS1Q8N1I8 211 aa21.27■■□□□ 1
VPS16-201ENST00000380443 METTL27Q8N6F8 245 aaPredicted RBP21.27■■□□□ 1
VPS16-201ENST00000380443 OR4C6Q8NH72 309 aa21.27■■□□□ 1
VPS16-201ENST00000380443 PTPMT1Q8WUK0 201 aaPredicted RBP21.27■■□□□ 1
VPS16-201ENST00000380443 IFT27Q9BW83 186 aa21.27■■□□□ 1
VPS16-201ENST00000380443 SLC19A3Q9BZV2 496 aa21.27■■□□□ 1
VPS16-201ENST00000380443 UBQLN4Q9NRR5 601 aa21.27■■□□□ 1
VPS16-201ENST00000380443 ICAM5Q9UMF0 924 aa21.27■■□□□ 1
VPS16-201ENST00000380443 CAB39Q9Y376 341 aaPredicted RBP21.27■■□□□ 1
VPS16-201ENST00000380443 KNL1Q8NG31 2342 aa21.27■■□□□ 1
VPS16-201ENST00000380443 RIIAD1A6NNX1 92 aa21.27■□□□□ 0.99
VPS16-201ENST00000380443 J3QRE1 110 aa21.27■□□□□ 0.99
VPS16-201ENST00000380443 TOX3O15405 576 aaPredicted RBP21.27■□□□□ 0.99
VPS16-201ENST00000380443 IL33O95760 270 aa21.27■□□□□ 0.99
VPS16-201ENST00000380443 HK1P19367 917 aa21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms