RNA–Protein interactions for RNA: ENST00000378308.6

USP9X-202, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP9X, Length 8,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-202ENST00000378308 TRAF3IP2O43734 574 aaPredicted RBP12.56□□□□□ -0.4
USP9X-202ENST00000378308 CD63P08962 238 aa12.56□□□□□ -0.4
USP9X-202ENST00000378308 CPT2P23786 658 aa12.56□□□□□ -0.4
USP9X-202ENST00000378308 EPHA5P54756 1037 aa12.56□□□□□ -0.4
USP9X-202ENST00000378308 SLC14A1Q13336 389 aa12.56□□□□□ -0.4
USP9X-202ENST00000378308 CTC1Q2NKJ3 1217 aa12.56□□□□□ -0.4
USP9X-202ENST00000378308 OSTM1Q86WC4 334 aa12.56□□□□□ -0.4
USP9X-202ENST00000378308 C1orf74Q96LT6 269 aa12.56□□□□□ -0.4
USP9X-202ENST00000378308 GFOD1Q9NXC2 390 aa12.56□□□□□ -0.4
USP9X-202ENST00000378308 AQP7O14520 342 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 ADOQ96SZ5 270 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 ZFYVE21Q9BQ24 234 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 NICN1Q9BSH3 213 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 PINK1Q9BXM7 581 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 EHFQ9NZC4 300 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 CT45A6P0DMU7 189 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 CT45A5P0DMU8 189 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 CT45A7P0DMV0 189 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 CT45A8P0DMV1 189 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 CT45A9P0DMV2 189 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 SPINT3P49223 89 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 CT45A2Q5DJT8 189 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 CT45A1Q5HYN5 189 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 C6orf136Q5SQH8 315 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 DCAF12L1Q5VU92 463 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 C4orf32Q8N8J7 132 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 CYB561A3Q8NBI2 242 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 CT45A3Q8NHU0 189 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 MIB2Q96AX9 1013 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 TOE1Q96GM8 510 aaKnown RBP12.55□□□□□ -0.4
USP9X-202ENST00000378308 UHRF2Q96PU4 802 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 ST6GALNAC4Q9H4F1 302 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 ARMC1Q9NVT9 282 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 RNF186Q9NXI6 227 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 PAQR5Q9NXK6 330 aaPredicted RBP12.55□□□□□ -0.4
USP9X-202ENST00000378308 A0A1W2PQL4 384 aaPredicted RBP12.55□□□□□ -0.4
USP9X-202ENST00000378308 SOBPA7XYQ1 873 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 ANGPTL7O43827 346 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 BCKDHBP21953 392 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 HTR5AP47898 357 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 OGFOD3Q6PK18 319 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 LCTLQ6UWM7 567 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 LIPIQ6XZB0 460 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 ZNF775Q96BV0 537 aaPredicted RBP12.55□□□□□ -0.4
USP9X-202ENST00000378308 ZFC3H1O60293 1989 aaKnown RBP12.55□□□□□ -0.4
USP9X-202ENST00000378308 A0A0J9YY10 115 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 A0A1W2PS29 197 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 CHRNB1P11230 501 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 ATP6AP1Q15904 470 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 ACSM3Q53FZ2 586 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 FAM57BQ71RH2 274 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 OR6F1Q8NGZ6 308 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 FAM122AQ96E09 287 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 INTS14Q96SY0 518 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 GNG12Q9UBI6 72 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 Q9Y3F1 56 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 BCAT2O15382 392 aaPredicted RBP12.55□□□□□ -0.4
USP9X-202ENST00000378308 OR2T1O43869 369 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 PRKYO43930 277 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 DNAJC22Q8N4W6 341 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 INTS12Q96CB8 462 aaKnown RBP12.55□□□□□ -0.4
USP9X-202ENST00000378308 SMOQ99835 787 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 UTP23Q9BRU9 249 aaKnown RBP12.55□□□□□ -0.4
USP9X-202ENST00000378308 SEMA6CQ9H3T2 930 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 SALL4Q9UJQ4 1053 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 LGALS8O00214 317 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 NPC1O15118 1278 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 FAM163BP0C2L3 166 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 CXCL12P48061 93 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 ERV3-1Q14264 604 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 CYP1B1Q16678 543 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 PIP5KL1Q5T9C9 394 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 SDR9C7Q8NEX9 313 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 MITD1Q8WV92 249 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 ZUFSPQ96AP4 578 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 SLC19A3Q9BZV2 496 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 CALHM2Q9HA72 323 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 FOLH1BQ9HBA9 442 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 ANKMY1Q9P2S6 941 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 HSFX1Q9UBD0 423 aa12.55□□□□□ -0.4
USP9X-202ENST00000378308 RAB3DO95716 219 aa12.54□□□□□ -0.4
USP9X-202ENST00000378308 CA3P07451 260 aa12.54□□□□□ -0.4
USP9X-202ENST00000378308 DIO3P55073 304 aa12.54□□□□□ -0.4
USP9X-202ENST00000378308 ERVK-25P63136 954 aa12.54□□□□□ -0.4
USP9X-202ENST00000378308 BAXQ07812 192 aa12.54□□□□□ -0.4
USP9X-202ENST00000378308 DOC2AQ14183 400 aa12.54□□□□□ -0.4
USP9X-202ENST00000378308 SPARTQ8N0X7 666 aa12.54□□□□□ -0.4
USP9X-202ENST00000378308 TM7SF3Q9NS93 570 aa12.54□□□□□ -0.4
USP9X-202ENST00000378308 RDH16O75452 317 aa12.54□□□□□ -0.4
USP9X-202ENST00000378308 IGHG1P01857 330 aa12.54□□□□□ -0.4
USP9X-202ENST00000378308 HLA-FP30511 346 aa12.54□□□□□ -0.4
USP9X-202ENST00000378308 RRADP55042 308 aa12.54□□□□□ -0.4
USP9X-202ENST00000378308 IKZF1Q13422 519 aa12.54□□□□□ -0.4
USP9X-202ENST00000378308 HIST2H3PS2Q5TEC6 136 aa12.54□□□□□ -0.4
USP9X-202ENST00000378308 PM20D2Q8IYS1 436 aa12.54□□□□□ -0.4
USP9X-202ENST00000378308 PLD6Q8N2A8 252 aaKnown RBP12.54□□□□□ -0.4
USP9X-202ENST00000378308 DPF1Q92782 380 aa12.54□□□□□ -0.4
USP9X-202ENST00000378308 ADAM19Q9H013 955 aa12.54□□□□□ -0.4
USP9X-202ENST00000378308 TPT1P13693 172 aaKnown RBP12.54□□□□□ -0.4
USP9X-202ENST00000378308 SNCAP37840 140 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms