RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 SKP2Q13309 424 aa12.89□□□□□ -0.35
TPM2-204ENST00000378300 TUBA3CQ13748 450 aa12.89□□□□□ -0.35
TPM2-204ENST00000378300 EFR3AQ14156 821 aa12.89□□□□□ -0.35
TPM2-204ENST00000378300 ZNF829Q3KNS6 432 aaPredicted RBP12.89□□□□□ -0.35
TPM2-204ENST00000378300 ENTPD8Q5MY95 495 aa12.89□□□□□ -0.35
TPM2-204ENST00000378300 BEST3Q8N1M1 668 aa12.89□□□□□ -0.35
TPM2-204ENST00000378300 CLEC1AQ8NC01 280 aa12.89□□□□□ -0.35
TPM2-204ENST00000378300 FAM71CQ8NEG0 241 aa12.89□□□□□ -0.35
TPM2-204ENST00000378300 ASB15Q8WXK1 588 aa12.89□□□□□ -0.35
TPM2-204ENST00000378300 ZNF524Q96C55 264 aa12.89□□□□□ -0.35
TPM2-204ENST00000378300 SH3YL1Q96HL8 342 aaPredicted RBP12.89□□□□□ -0.35
TPM2-204ENST00000378300 RDH12Q96NR8 316 aa12.89□□□□□ -0.35
TPM2-204ENST00000378300 MCHR1Q99705 422 aa12.89□□□□□ -0.35
TPM2-204ENST00000378300 ARMC7Q9H6L4 198 aa12.89□□□□□ -0.35
TPM2-204ENST00000378300 NMNAT1Q9HAN9 279 aaPredicted RBP12.89□□□□□ -0.35
TPM2-204ENST00000378300 ACER3Q9NUN7 267 aa12.89□□□□□ -0.35
TPM2-204ENST00000378300 SAMHD1Q9Y3Z3 626 aaKnown RBP12.89□□□□□ -0.35
TPM2-204ENST00000378300 HRH3Q9Y5N1 445 aa12.89□□□□□ -0.35
TPM2-204ENST00000378300 LYVE1Q9Y5Y7 322 aa12.89□□□□□ -0.35
TPM2-204ENST00000378300 CHCHD2Q9Y6H1 151 aaPredicted RBP12.89□□□□□ -0.35
TPM2-204ENST00000378300 HEATR5AQ86XA9 2040 aa12.89□□□□□ -0.35
TPM2-204ENST00000378300 A0A1W2PQD3 144 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 A6NL46 340 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 B4DXG7 233 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 NDUFB5O43674 189 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 E2F6O75461 281 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 HPRP00739 348 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 UBL4AP11441 157 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 ZNF12P17014 697 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 ADH7P40394 386 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 PTGDSP41222 190 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 ENTPD1P49961 510 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 TMBIM6P55061 237 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 ZNF117Q03924 483 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 RAB39AQ14964 217 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 OTUD3Q5T2D3 398 aaPredicted RBP12.88□□□□□ -0.35
TPM2-204ENST00000378300 OR5M10Q6IEU7 315 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 ZNF773Q6PK81 442 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 OPN5Q6U736 354 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 NUP54Q7Z3B4 507 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 CMIPQ8IY22 773 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 TMEM156Q8N614 296 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 ZNF248Q8NDW4 579 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 OR4C15Q8NGM1 316 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 THAP4Q8WY91 577 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 TMCO6Q96DC7 493 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 PRRC1Q96M27 445 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 LHPPQ9H008 270 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 REEP1Q9H902 201 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 MAN2C1Q9NTJ4 1040 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 SLC35A3Q9Y2D2 325 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 EML6Q6ZMW3 1958 aa12.88□□□□□ -0.35
TPM2-204ENST00000378300 LAMA5O15230 3695 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 APC2O95996 2303 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 GTPBP1O00178 669 aaKnown RBP12.87□□□□□ -0.35
TPM2-204ENST00000378300 TNFRSF11BO00300 401 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 ADAMDEC1O15204 470 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 ZNF264O43296 627 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 GADD45GO95257 159 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 LIMS1P48059 325 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 GAS1P54826 345 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 LSM11P83369 360 aaKnown RBP eCLIP12.87□□□□□ -0.359e-7■□□□□ 11.1
TPM2-204ENST00000378300 CDC20Q12834 499 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 PMS2P3Q13401 168 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 MEP1AQ16819 746 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 EXOC3L2Q2M3D2 409 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 PRAMEF20Q5VT98 475 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 JMJD6Q6NYC1 403 aaPredicted RBP12.87□□□□□ -0.35
TPM2-204ENST00000378300 PLEKHM3Q6ZWE6 761 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 MDGA2Q7Z553 956 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 DUSP19Q8WTR2 217 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 RNF138Q8WVD3 245 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 TTC9Q92623 222 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 ABTB1Q969K4 478 aaPredicted RBP12.87□□□□□ -0.35
TPM2-204ENST00000378300 ING2Q9H160 280 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 STMN3Q9NZ72 180 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 PCNX3Q9H6A9 2034 aa12.87□□□□□ -0.35
TPM2-204ENST00000378300 TRBV4-1A0A0J9YWV2 114 aa12.86□□□□□ -0.35
TPM2-204ENST00000378300 G3V2T6 193 aa12.86□□□□□ -0.35
TPM2-204ENST00000378300 HCRTR2O43614 444 aa12.86□□□□□ -0.35
TPM2-204ENST00000378300 DPM1O60762 260 aa12.86□□□□□ -0.35
TPM2-204ENST00000378300 HNRNPCP07910 306 aaKnown RBP eCLIP12.86□□□□□ -0.35
TPM2-204ENST00000378300 INHBBP09529 407 aa12.86□□□□□ -0.35
TPM2-204ENST00000378300 CCL3P10147 92 aa12.86□□□□□ -0.35
TPM2-204ENST00000378300 PTNP21246 168 aa12.86□□□□□ -0.35
TPM2-204ENST00000378300 CASP3P42574 277 aa12.86□□□□□ -0.35
TPM2-204ENST00000378300 TAS2R41P59536 307 aa12.86□□□□□ -0.35
TPM2-204ENST00000378300 OR1Q1Q15612 314 aa12.86□□□□□ -0.35
TPM2-204ENST00000378300 INPP5JQ15735 1006 aaPredicted RBP12.86□□□□□ -0.35
TPM2-204ENST00000378300 STK32CQ86UX6 486 aa12.86□□□□□ -0.35
TPM2-204ENST00000378300 RANBP3LQ86VV4 465 aaPredicted RBP12.86□□□□□ -0.35
TPM2-204ENST00000378300 CYP4Z1Q86W10 505 aa12.86□□□□□ -0.35
TPM2-204ENST00000378300 GALNT16Q8N428 558 aa12.86□□□□□ -0.35
TPM2-204ENST00000378300 TMCO5AQ8N6Q1 288 aa12.86□□□□□ -0.35
TPM2-204ENST00000378300 OR13F1Q8NGS4 319 aa12.86□□□□□ -0.35
TPM2-204ENST00000378300 SNIP1Q8TAD8 396 aaKnown RBP12.86□□□□□ -0.35
TPM2-204ENST00000378300 TBC1D15Q8TC07 691 aa12.86□□□□□ -0.35
TPM2-204ENST00000378300 OIT3Q8WWZ8 545 aa12.86□□□□□ -0.35
TPM2-204ENST00000378300 DHRS1Q96LJ7 313 aa12.86□□□□□ -0.35
TPM2-204ENST00000378300 CCNL2Q96S94 520 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms