RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 CACNG6Q9BXT2 260 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 SLC5A7Q9GZV3 580 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 PCDHGA7Q9Y5G6 932 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 LOC105369274A0A096LPK9 316 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 WNT11O96014 354 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 IL2RAP01589 272 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 LCATP04180 440 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 MMP2P08253 660 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 PRKCAP17252 672 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 GGT1P19440 569 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 HNRNPFP52597 415 aaKnown RBP10.14□□□□□ -0.79
HIF3A-205ENST00000377670 TAS2R38P59533 333 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 ERVK-25P63136 954 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 RIPPLY1Q0D2K3 151 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 CDK10Q15131 360 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 EXT1Q16394 746 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 PRSS48Q7RTY5 328 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 OR4N4Q8N0Y3 316 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 OR51Q1Q8NH59 317 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 HS6ST2Q96MM7 605 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 ZNF559Q9BR84 538 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 WDR83Q9BRX9 315 aaKnown RBP10.14□□□□□ -0.79
HIF3A-205ENST00000377670 LYRM1O43325 122 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 TNFRSF1BP20333 461 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 DRD5P21918 477 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 UGT2B10P36537 528 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 TRAM1Q15629 374 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 CDNFQ49AH0 187 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 PAPD5Q8NDF8 572 aaKnown RBP10.14□□□□□ -0.79
HIF3A-205ENST00000377670 SLC29A1Q99808 456 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 VRK1Q99986 396 aaPredicted RBP10.14□□□□□ -0.79
HIF3A-205ENST00000377670 DHRS4Q9BTZ2 278 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 OBP2BQ9NPH6 170 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 ASF1BQ9NVP2 202 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 TMEM181Q9P2C4 612 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 ENPP5Q9UJA9 477 aa10.14□□□□□ -0.79
HIF3A-205ENST00000377670 F8W036 122 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 SPDEFO95238 335 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 S100PP25815 95 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 PTPN6P29350 595 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 CA5AP35218 305 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 ADRA1AP35348 466 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 BLOC1S1P78537 153 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 ZNF616Q08AN1 781 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 CTSL3PQ5NE16 218 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 OR6Q1Q8NGQ2 317 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 SLC2A12Q8TD20 617 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 LKAAEAR1Q8TD35 194 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 HOXB13Q92826 284 aaPredicted RBP10.13□□□□□ -0.79
HIF3A-205ENST00000377670 MSLNLQ96KJ4 702 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 RREB1Q92766 1687 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 DPM1O60762 260 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 DHRS4L1P0CG22 281 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 HMGA1P17096 107 aaKnown RBP10.13□□□□□ -0.79
HIF3A-205ENST00000377670 NAA10P41227 235 aaPredicted RBP10.13□□□□□ -0.79
HIF3A-205ENST00000377670 CRYZQ08257 329 aaKnown RBP10.13□□□□□ -0.79
HIF3A-205ENST00000377670 DHRS13Q6UX07 377 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 BAIAP2L2Q6UXY1 529 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 LRR1Q96L50 414 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 MROQ9BYG7 248 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 MAGIXQ9H6Y5 334 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 HSPE1-MOB4S4R3N1 261 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 TUBGCP6Q96RT7 1819 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 C1orf196B1AJZ1 125 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 NME4O00746 187 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 CAPN3P20807 821 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 MAGEA6P43360 314 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 LGALS4P56470 323 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 ZP2Q05996 745 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 FGL1Q08830 312 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 CBARPQ8N350 705 aaPredicted RBP10.13□□□□□ -0.79
HIF3A-205ENST00000377670 C2orf42Q9NWW7 574 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 DOCK5Q9H7D0 1870 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 OR5K3A6NET4 321 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 FIGNL2A6NMB9 653 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 CAPNS1P04632 268 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 RAB3BP20337 219 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 KDELR2P33947 212 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 HLA-BQ31612 363 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 ATAD3CQ5T2N8 411 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 KCTD11Q693B1 232 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 TMPRSS12Q86WS5 348 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 ETFBKMTQ8IXQ9 262 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.13□□□□□ -0.79
HIF3A-205ENST00000377670 ANKRD31Q8N7Z5 1873 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 HMX3A6NHT5 357 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 ZNF891A8MT65 544 aaPredicted RBP10.13□□□□□ -0.79
HIF3A-205ENST00000377670 M0R129 80 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 PRKYO43930 277 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 GK2Q14410 553 aaPredicted RBP10.13□□□□□ -0.79
HIF3A-205ENST00000377670 RBM39Q14498 530 aaKnown RBP10.13□□□□□ -0.79
HIF3A-205ENST00000377670 C9orf135Q5VTT2 229 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 OR2T33Q8NG76 320 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 OR2A12Q8NGT7 310 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 INPP5KQ9BT40 448 aa10.13□□□□□ -0.79
HIF3A-205ENST00000377670 COL11A2P13942 1736 aaPredicted RBP10.12□□□□□ -0.79
HIF3A-205ENST00000377670 hCG_1809904A0A1W2PP81 198 aa10.12□□□□□ -0.79
HIF3A-205ENST00000377670 A0A1W2PPE2 198 aa10.12□□□□□ -0.79
HIF3A-205ENST00000377670 A0A1W2PR64 198 aa10.12□□□□□ -0.79
HIF3A-205ENST00000377670 A0A1W2PRV1 198 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms