RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 YLPM1P49750 1951 aaKnown RBP17.1■□□□□ 0.33
CBWD3-204ENST00000377349 A0A1W2PQD3 144 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 C7orf72A4D263 438 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 ESPNB1AK53 854 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 INAFM1C9JVW0 142 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 ADAMDEC1O15204 470 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 OIP5O43482 229 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 CNOT4O95628 575 aaKnown RBP17.1■□□□□ 0.33
CBWD3-204ENST00000377349 MATN1P21941 496 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 LCN1P31025 176 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 MPP2Q14168 576 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 CBLN3Q6UW01 205 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 PLEKHM3Q6ZWE6 761 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 OLIG3Q7RTU3 272 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 C16orf62Q7Z3J2 963 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 C6orf120Q7Z4R8 191 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 LILRA2Q8N149 483 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 PSMA8Q8TAA3 256 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 SORT1Q99523 831 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 HOXD1Q9GZZ0 328 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 ADAM21Q9UKJ8 722 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 RAB21Q9UL25 225 aa17.1■□□□□ 0.33
CBWD3-204ENST00000377349 PPP3CBP16298 524 aa17.09■□□□□ 0.33
CBWD3-204ENST00000377349 KRTAP1-1Q07627 177 aa17.09■□□□□ 0.33
CBWD3-204ENST00000377349 BST1Q10588 318 aa17.09■□□□□ 0.33
CBWD3-204ENST00000377349 EXOSC6Q5RKV6 272 aaKnown RBP17.09■□□□□ 0.33
CBWD3-204ENST00000377349 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.09■□□□□ 0.33
CBWD3-204ENST00000377349 PDSS1Q5T2R2 415 aa17.09■□□□□ 0.33
CBWD3-204ENST00000377349 OR2V1Q8NHB1 315 aa17.09■□□□□ 0.33
CBWD3-204ENST00000377349 FBXO27Q8NI29 283 aa17.09■□□□□ 0.33
CBWD3-204ENST00000377349 POC1BQ8TC44 478 aa17.09■□□□□ 0.33
CBWD3-204ENST00000377349 ACTRT2Q8TDY3 377 aa17.09■□□□□ 0.33
CBWD3-204ENST00000377349 REXO5Q96IC2 774 aaKnown RBP17.09■□□□□ 0.33
CBWD3-204ENST00000377349 C12orf49Q9H741 205 aa17.09■□□□□ 0.33
CBWD3-204ENST00000377349 ASIC5Q9NY37 505 aa17.09■□□□□ 0.33
CBWD3-204ENST00000377349 MARCOQ9UEW3 520 aaPredicted RBP17.09■□□□□ 0.33
CBWD3-204ENST00000377349 A0A0J9YW62 118 aa17.08■□□□□ 0.32
CBWD3-204ENST00000377349 KITP10721 976 aa17.08■□□□□ 0.32
CBWD3-204ENST00000377349 LBPP18428 481 aa17.08■□□□□ 0.32
CBWD3-204ENST00000377349 CHI3L1P36222 383 aaPredicted RBP17.08■□□□□ 0.32
CBWD3-204ENST00000377349 ATP12AP54707 1039 aa17.08■□□□□ 0.32
CBWD3-204ENST00000377349 RAC1P63000 192 aa17.08■□□□□ 0.32
CBWD3-204ENST00000377349 PDZK1Q5T2W1 519 aa17.08■□□□□ 0.32
CBWD3-204ENST00000377349 TNFAIP8L2Q6P589 184 aaPredicted RBP17.08■□□□□ 0.32
CBWD3-204ENST00000377349 KLHL15Q96M94 604 aa17.08■□□□□ 0.32
CBWD3-204ENST00000377349 C9JVG2 144 aa17.07■□□□□ 0.32
CBWD3-204ENST00000377349 DHRS4L1P0CG22 281 aa17.07■□□□□ 0.32
CBWD3-204ENST00000377349 UBL4AP11441 157 aa17.07■□□□□ 0.32
CBWD3-204ENST00000377349 SHC1P29353 583 aa17.07■□□□□ 0.32
CBWD3-204ENST00000377349 P2RX1P51575 399 aa17.07■□□□□ 0.32
CBWD3-204ENST00000377349 TOMM34Q15785 309 aaPredicted RBP17.07■□□□□ 0.32
CBWD3-204ENST00000377349 KLHL26Q53HC5 615 aa17.07■□□□□ 0.32
CBWD3-204ENST00000377349 ALKBH2Q6NS38 261 aa17.07■□□□□ 0.32
CBWD3-204ENST00000377349 ESPNLQ6ZVH7 1005 aa17.07■□□□□ 0.32
CBWD3-204ENST00000377349 MTERF4Q7Z6M4 381 aaKnown RBP17.07■□□□□ 0.32
CBWD3-204ENST00000377349 CROCCP2Q86T23 111 aa17.07■□□□□ 0.32
CBWD3-204ENST00000377349 ZNF611Q8N823 705 aa17.07■□□□□ 0.32
CBWD3-204ENST00000377349 VPS37AQ8NEZ2 397 aa17.07■□□□□ 0.32
CBWD3-204ENST00000377349 ROBO4Q8WZ75 1007 aa17.07■□□□□ 0.32
CBWD3-204ENST00000377349 PLPPR2Q96GM1 343 aa17.07■□□□□ 0.32
CBWD3-204ENST00000377349 ACTR6Q9GZN1 396 aa17.07■□□□□ 0.32
CBWD3-204ENST00000377349 OR51I1Q9H343 314 aa17.07■□□□□ 0.32
CBWD3-204ENST00000377349 SERHL2Q9H4I8 314 aa17.07■□□□□ 0.32
CBWD3-204ENST00000377349 PAQR5Q9NXK6 330 aaPredicted RBP17.07■□□□□ 0.32
CBWD3-204ENST00000377349 MKLN1Q9UL63 735 aa17.07■□□□□ 0.32
CBWD3-204ENST00000377349 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.07■□□□□ 0.32
CBWD3-204ENST00000377349 DTNAQ9Y4J8 743 aa17.07■□□□□ 0.32
CBWD3-204ENST00000377349 GOLGA8QA0A0J9YX86 632 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 TMEM120BA0PK00 339 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 GOLGA8OA6NCC3 632 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 GOLGA8NF8WBI6 632 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 RNASET2O00584 256 aaKnown RBP17.06■□□□□ 0.32
CBWD3-204ENST00000377349 HS3ST1O14792 307 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 SOX30O94993 753 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 LINGO3P0C6S8 592 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 PSMB1P20618 241 aaKnown RBP17.06■□□□□ 0.32
CBWD3-204ENST00000377349 AGTR1P30556 359 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 EIF1P41567 113 aaKnown RBP17.06■□□□□ 0.32
CBWD3-204ENST00000377349 NR1H2P55055 460 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 CARD18P57730 90 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 SMU1Q2TAY7 513 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 FAM174BQ3ZCQ3 159 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 SPANXN4Q5MJ08 99 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 ATAD3BQ5T9A4 648 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 ANXA8L1Q5VT79 327 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 HMGN2P46Q86SG4 172 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 PIP4P2Q8N4L2 257 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 LILRB1Q8NHL6 650 aaPredicted RBP17.06■□□□□ 0.32
CBWD3-204ENST00000377349 TMEM171Q8WVE6 324 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 XAGE5Q8WWM1 108 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 OSTF1Q92882 214 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 RAB8BQ92930 207 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 OR10A4Q9H209 315 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 GLRX2Q9NS18 164 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 EXD2Q9NVH0 621 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 ACTL7BQ9Y614 415 aa17.06■□□□□ 0.32
CBWD3-204ENST00000377349 HEATR1Q9H583 2144 aaKnown RBP17.06■□□□□ 0.32
CBWD3-204ENST00000377349 DUXAA6NLW8 204 aa17.05■□□□□ 0.32
CBWD3-204ENST00000377349 ZNF264O43296 627 aa17.05■□□□□ 0.32
CBWD3-204ENST00000377349 EFNA2O43921 213 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms