RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 SLC25A30Q5SVS4 291 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 DCST1Q5T197 706 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 MFSD4BQ5TF39 518 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 B3GNTL1Q67FW5 361 aaPredicted RBP11.42□□□□□ -0.58
VRK3-202ENST00000377011 TMEM53Q6P2H8 277 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 CD300LDQ6UXZ3 194 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 ATCAYQ86WG3 371 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 POC5Q8NA72 575 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 OR5AK3PQ8NH89 298 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 GTPBP3Q969Y2 492 aaKnown RBP11.42□□□□□ -0.58
VRK3-202ENST00000377011 ZBED6CLQ96FA7 236 aaPredicted RBP11.42□□□□□ -0.58
VRK3-202ENST00000377011 ZNF354BQ96LW1 612 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 SMAD5Q99717 465 aaKnown RBP11.42□□□□□ -0.58
VRK3-202ENST00000377011 ZNF717Q9BY31 904 aaPredicted RBP11.42□□□□□ -0.58
VRK3-202ENST00000377011 C6orf62Q9GZU0 229 aaPredicted RBP11.42□□□□□ -0.58
VRK3-202ENST00000377011 OR51E2Q9H255 320 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 PRDM7Q9NQW5 492 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 ABCB10Q9NRK6 738 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 TAS2R7Q9NYW3 318 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 REV1Q9UBZ9 1251 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 TRAPPC4Q9Y296 219 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 PCDHGA9Q9Y5G4 932 aaKnown RBP11.42□□□□□ -0.58
VRK3-202ENST00000377011 LOC102723996A0A087X1L8 192 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 WASHC1A8K0Z3 465 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 SNPHO15079 494 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 ERI3O43414 337 aaKnown RBP11.41□□□□□ -0.58
VRK3-202ENST00000377011 F10P00742 488 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 APOA1P02647 267 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 GBAP04062 536 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 H1F0P07305 194 aaKnown RBP11.41□□□□□ -0.58
VRK3-202ENST00000377011 MAOAP21397 527 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 PPP2R1BP30154 601 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 GRK5P34947 590 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 BSGP35613 385 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 TGFBR1P36897 503 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 KCNJ5P48544 419 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 RGS1Q08116 209 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 COX10Q12887 443 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 OCLNQ16625 522 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 SPANXN2Q5MJ10 180 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 STEAP3Q658P3 488 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 ABHD17CQ6PCB6 329 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 ANKRD37Q7Z713 158 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 CCDC190Q86UF4 302 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 NUDT13Q86X67 352 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 PARP16Q8N5Y8 322 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 HORMAD2Q8N7B1 307 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 OR8J1Q8NGP2 316 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 SLC38A5Q8WUX1 472 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 NR4A3Q92570 626 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 UCN3Q969E3 161 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 TM4SF18Q96CE8 201 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 THOC3Q96J01 351 aaKnown RBP11.41□□□□□ -0.58
VRK3-202ENST00000377011 FUZQ9BT04 418 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 TMEM165Q9HC07 324 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 AMBNQ9NP70 447 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 C14orf105Q9NVL8 296 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 EHD3Q9NZN3 535 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 SEC14L4Q9UDX3 406 aa11.41□□□□□ -0.58
VRK3-202ENST00000377011 RPL36Q9Y3U8 105 aaKnown RBP11.41□□□□□ -0.58
VRK3-202ENST00000377011 USP9XQ93008 2570 aaPredicted RBP11.41□□□□□ -0.58
VRK3-202ENST00000377011 LOC100506127A0A0U1RQW1 187 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 FFAR1O14842 300 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 DYRK3O43781 588 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 CLEC3AO75596 197 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 CD63P08962 238 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 ELAVL4P26378 380 aaKnown RBP11.4□□□□□ -0.58
VRK3-202ENST00000377011 ANXA11P50995 505 aaKnown RBP11.4□□□□□ -0.58
VRK3-202ENST00000377011 PGDP52209 483 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 MANFP55145 182 aaKnown RBP11.4□□□□□ -0.58
VRK3-202ENST00000377011 TPTEP56180 551 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 TLE1Q04724 770 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 DUSP7Q16829 419 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 SIRT6Q8N6T7 355 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 CLEC1AQ8NC01 280 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 SETD6Q8TBK2 473 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 BRIX1Q8TDN6 353 aaKnown RBP11.4□□□□□ -0.58
VRK3-202ENST00000377011 TMEM80Q96HE8 168 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 TMEM19Q96HH6 336 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 IMMP1LQ96LU5 166 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 FER1L6-AS2Q96M78 137 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 CHCHD6Q9BRQ6 235 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 CENPOQ9BU64 300 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 SPATA5L1Q9BVQ7 753 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 MND1Q9BWT6 205 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 ATP13A2Q9NQ11 1180 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 LSM2Q9Y333 95 aaKnown RBP11.4□□□□□ -0.58
VRK3-202ENST00000377011 CPAMD8Q8IZJ3 1885 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 TRBV4-1A0A0J9YWV2 114 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 A0A1W2PQ72 361 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 A0A1W2PRQ8 180 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 IRGMA1A4Y4 181 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 TBX1O43435 398 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 KIAA0513O60268 411 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 PRKRAO75569 313 aaKnown RBP11.4□□□□□ -0.58
VRK3-202ENST00000377011 HPP00738 406 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 BCHEP06276 602 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 FHP07954 510 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 C8orf89P0DMQ9 161 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 SFTPCP11686 197 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms