RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 RAB38P57729 211 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 MRPS21P82921 87 aaKnown RBP8.85□□□□□ -0.99
TRIM39-202ENST00000376659 Q5BKY6 102 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 DMKNQ6E0U4 476 aaPredicted RBP8.85□□□□□ -0.99
TRIM39-202ENST00000376659 SDE2Q6IQ49 451 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 METAP1DQ6UB28 335 aaPredicted RBP8.85□□□□□ -0.99
TRIM39-202ENST00000376659 ABHD13Q7L211 337 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 CXXC5Q7LFL8 322 aaKnown RBP8.85□□□□□ -0.99
TRIM39-202ENST00000376659 C17orf82Q86X59 251 aaPredicted RBP8.85□□□□□ -0.99
TRIM39-202ENST00000376659 Q8N9G6 341 aaPredicted RBP8.85□□□□□ -0.99
TRIM39-202ENST00000376659 C17orf47Q8NEP4 570 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 NLGN4YQ8NFZ3 816 aaPredicted RBP8.85□□□□□ -0.99
TRIM39-202ENST00000376659 OR13C2Q8NGS9 318 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 ZCCHC10Q8TBK6 192 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 ARSGQ96EG1 525 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 ZNF486Q96H40 463 aaPredicted RBP8.85□□□□□ -0.99
TRIM39-202ENST00000376659 HS6ST2Q96MM7 605 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 SLC38A2Q96QD8 506 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 GFI1Q99684 422 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.85□□□□□ -0.99
TRIM39-202ENST00000376659 IGFLR1Q9H665 355 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 ZNF229Q9UJW7 825 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 FBXL4Q9UKA2 621 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 GOLGA4Q13439 2230 aaKnown RBP8.85□□□□□ -0.99
TRIM39-202ENST00000376659 IGKV1D-42A0A075B6H8 117 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 GTPBP1O00178 669 aaKnown RBP8.85□□□□□ -0.99
TRIM39-202ENST00000376659 HPGDSO60760 199 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 STX11O75558 287 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 DLGAP3O95886 979 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 TFP02787 698 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 CLUP10909 449 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 GLULP15104 373 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 POLR2CP19387 275 aaPredicted RBP8.85□□□□□ -0.99
TRIM39-202ENST00000376659 MST1P26927 711 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 RBM34P42696 430 aaKnown RBP8.85□□□□□ -0.99
TRIM39-202ENST00000376659 RNF144AP50876 292 aaPredicted RBP8.85□□□□□ -0.99
TRIM39-202ENST00000376659 MXD1Q05195 221 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 FGFBP1Q14512 234 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 COL13A1Q5TAT6 717 aaPredicted RBP8.85□□□□□ -0.99
TRIM39-202ENST00000376659 GID4Q8IVV7 300 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 YAF2Q8IY57 180 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 TEX19Q8NA77 164 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 ADAMTS15Q8TE58 950 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 UPRTQ96BW1 309 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 TMEM43Q9BTV4 400 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 MFRPQ9BY79 579 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 CPNE7Q9UBL6 633 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 TMEM184BQ9Y519 407 aaPredicted RBP8.85□□□□□ -0.99
TRIM39-202ENST00000376659 ENTPD2Q9Y5L3 495 aa8.85□□□□□ -0.99
TRIM39-202ENST00000376659 LOC105371267A0A1B0GV96 52 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 PRR32B1ATL7 298 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 CD1AP06126 327 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 PTNP21246 168 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 GPR3P46089 330 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 MTNR1BP49286 362 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 NKX2-5P52952 324 aaPredicted RBP8.84□□□□□ -0.99
TRIM39-202ENST00000376659 LBX1P52954 281 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 PPP3R1P63098 170 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 NDUFA5Q16718 116 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 SIGIRRQ6IA17 410 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 LRRC75AQ8NAA5 344 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 SLC37A3Q8NCC5 494 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 SMRP1Q8NCR6 262 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 OR4N2Q8NGD1 307 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 SLC37A2Q8TED4 501 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 RFKQ969G6 155 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 DEPDC7Q96QD5 511 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 ERVMER34-1Q9H9K5 563 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 ANKRD61A6NGH8 418 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 E2F1Q01094 437 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 KRR1Q13601 381 aaKnown RBP8.84□□□□□ -0.99
TRIM39-202ENST00000376659 CARTPTQ16568 116 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 B3GLCTQ6Y288 498 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 ZNF615Q8N8J6 731 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 OR7G1Q8NGA0 311 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 CNOT9Q92600 299 aaKnown RBP8.84□□□□□ -0.99
TRIM39-202ENST00000376659 INPP5EQ9NRR6 644 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 C2orf42Q9NWW7 574 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 SPTY2D1-AS1A0A0U1RR47 76 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 MEIOCA2RUB1 952 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 OR5K3A6NET4 321 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 ZNF860A6NHJ4 632 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 LANCL1O43813 399 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 IGF2P01344 180 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 SLC35E2P0CK97 266 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 CT45A8P0DMV1 189 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 CT45A9P0DMV2 189 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 CSRP1P21291 193 aaKnown RBP8.84□□□□□ -0.99
TRIM39-202ENST00000376659 ACTR1BP42025 376 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 OR2B6P58173 313 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 ACTR1AP61163 376 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 ID2Q02363 134 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 CRMP1Q14194 572 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 CT45A2Q5DJT8 189 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 PLBD1Q6P4A8 553 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 ZNF517Q6ZMY9 492 aaPredicted RBP8.84□□□□□ -0.99
TRIM39-202ENST00000376659 MTSS1LQ765P7 747 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 GLCCI1Q86VQ1 547 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 SLC43A2Q8N370 569 aa8.84□□□□□ -0.99
TRIM39-202ENST00000376659 KLHL36Q8N4N3 616 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms