RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 CNTN4Q8IWV2 1026 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 OR1S2Q8NGQ3 325 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 SLC35B2Q8TB61 432 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 C10orf90Q96M02 699 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 ARV1Q9H2C2 271 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 PIGVQ9NUD9 493 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 ANHXE9PGG2 379 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 GDI1P31150 447 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 OR4C11Q6IEV9 310 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 ESPNLQ6ZVH7 1005 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 DEFB118Q96PH6 123 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 CXorf49A8MYA2 514 aaPredicted RBP10.99□□□□□ -0.65
VPS13A-205ENST00000376636 CAPNS1P04632 268 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 CT45A10P0DMU9 189 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 CTXN1P60606 82 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 VAMP3Q15836 100 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 LCN8Q6JVE9 175 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 SERPINA11Q86U17 422 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 FRS2Q8WU20 508 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 DIO2Q92813 273 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 HHIPL1Q96JK4 782 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 GPR52Q9Y2T5 361 aa10.99□□□□□ -0.65
VPS13A-205ENST00000376636 A0A1W2PRU2 124 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 RAB5AP20339 215 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 DTYMKP23919 212 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 TBPL1P62380 186 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 FAM180BQ6P0A1 224 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 KLHDC1Q8N7A1 406 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 ADAMTS14Q8WXS8 1223 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 FEVQ99581 238 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 MCTS1Q9ULC4 181 aaKnown RBP10.98□□□□□ -0.65
VPS13A-205ENST00000376636 LRIT2A6NDA9 550 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 FAM155AB1AL88 458 aaPredicted RBP10.98□□□□□ -0.65
VPS13A-205ENST00000376636 YY2O15391 372 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 S100A8P05109 93 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 PTTG1IPP53801 180 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 LYRM7Q5U5X0 104 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 GLB1L2Q8IW92 636 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 CHRDQ9H2X0 955 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 TMEM82A0PJX8 343 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 PRSS44E7EML9 344 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 TAS2R38P59533 333 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 CRMP1Q14194 572 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 FAM110CQ1W6H9 321 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 FBXL22Q6P050 247 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 C22orf39Q6P5X5 142 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 EVA1AQ9H8M9 152 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 KLRG2A4D1S0 409 aaPredicted RBP10.98□□□□□ -0.65
VPS13A-205ENST00000376636 HPGDSO60760 199 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 ARHGEF15O94989 841 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 MT-ND4P03905 459 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 METTL27Q8N6F8 245 aaPredicted RBP10.98□□□□□ -0.65
VPS13A-205ENST00000376636 CMASQ8NFW8 434 aaPredicted RBP10.98□□□□□ -0.65
VPS13A-205ENST00000376636 OR14L1PQ8NHC6 308 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 ZNF582Q96NG8 517 aaPredicted RBP10.98□□□□□ -0.65
VPS13A-205ENST00000376636 SEMA4CQ9C0C4 833 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 ATXN7L1Q9ULK2 861 aaPredicted RBP10.98□□□□□ -0.65
VPS13A-205ENST00000376636 DCDC2BA2VCK2 349 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 NUDT19A8MXV4 375 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 THBS1P07996 1170 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 RELAQ04206 551 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 APOOLQ6UXV4 268 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 PLXDC1Q8IUK5 500 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 KCNRGQ8N5I3 272 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 ANKRD60Q9BZ19 345 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 CDK5RAP2Q96SN8 1893 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 POLR2CP19387 275 aaPredicted RBP10.98□□□□□ -0.65
VPS13A-205ENST00000376636 IL3RAP26951 378 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 SLX4IPQ5VYV7 408 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 SHEQ5VZ18 495 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 PXT1Q8NFP0 134 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 SCAMP5Q8TAC9 235 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 KCTD12Q96CX2 325 aaKnown RBP10.98□□□□□ -0.65
VPS13A-205ENST00000376636 FBRSL1Q9HCM7 1045 aaKnown RBP10.98□□□□□ -0.65
VPS13A-205ENST00000376636 LIN7CQ9NUP9 197 aaKnown RBP10.98□□□□□ -0.65
VPS13A-205ENST00000376636 CRYM-AS1A6NIL9 109 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 CD79AP11912 226 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 Q1RN00 199 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 ZNF836Q6ZNA1 936 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 MCATQ8IVS2 390 aaKnown RBP10.98□□□□□ -0.65
VPS13A-205ENST00000376636 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.98□□□□□ -0.65
VPS13A-205ENST00000376636 CSNK1A1LQ8N752 337 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 THAP3Q8WTV1 239 aaPredicted RBP10.98□□□□□ -0.65
VPS13A-205ENST00000376636 OR5B2Q96R09 309 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 THSD1Q9NS62 852 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 MYEF2Q9P2K5 600 aaKnown RBP10.98□□□□□ -0.65
VPS13A-205ENST00000376636 V9GY05 133 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 MBP02144 154 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 ADH4P08319 380 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 RPS5P46782 204 aaKnown RBP10.98□□□□□ -0.65
VPS13A-205ENST00000376636 CXADRP78310 365 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 SEMG2Q02383 582 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 UGT2A1Q9Y4X1 527 aa10.98□□□□□ -0.65
VPS13A-205ENST00000376636 LMO2P25791 158 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 TACR3P29371 465 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 CSN1S1P47710 185 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 RAC1P63000 192 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 ADIRFQ15847 76 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 TMEM244Q5VVB8 128 aa10.97□□□□□ -0.65
VPS13A-205ENST00000376636 SLC7A5P1Q8MH63 180 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms