RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 STEAP1Q9UHE8 339 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 LOC105369274A0A096LPK9 316 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 C17orf105B2RV13 164 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 DOC2AQ14183 400 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 IGDCC3Q8IVU1 814 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 OR4N4Q8N0Y3 316 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 SLC17A9Q9BYT1 436 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 SLC25A18Q9H1K4 315 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 SLC23A2Q9UGH3 650 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 KDM4FA0A1W2PPD8 638 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 DCDC2BA2VCK2 349 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 ATP6V1G2-DDX39BF2Z307 99 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 NDUFB2O95178 105 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 ABOP16442 354 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 HOXA1P49639 335 aaPredicted RBP11.75□□□□□ -0.53
VPS13A-204ENST00000376634 CLDN8P56748 225 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 CDONQ4KMG0 1287 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 NOXA1Q86UR1 476 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 PSMF1Q92530 271 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 SCAMP4Q969E2 229 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 ZNF337Q9Y3M9 751 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 CAPNS1P04632 268 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 SLURP2P0DP57 97 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 KDELR2P33947 212 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 P2RX1P51575 399 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 F2RL1P55085 397 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 HEPHL1Q6MZM0 1159 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 C14orf80Q86SX3 495 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 SLC5A8Q8N695 610 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 OR51L1Q8NGJ5 315 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 DPF1Q92782 380 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 TANKQ92844 425 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 SERINC2Q96SA4 455 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 RPH3ALQ9UNE2 315 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 AK6Q9Y3D8 172 aaKnown RBP11.75□□□□□ -0.53
VPS13A-204ENST00000376634 NFKBIEO00221 500 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 LYRM1O43325 122 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 VWA5B2Q8N398 1253 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 DYNLRB1Q9NP97 96 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 CACNA1GO43497 2377 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 BLACEA4D250 179 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 TRAPPC2LH3BP13 241 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 CHRM4P08173 479 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 MGST1P10620 155 aaKnown RBP11.75□□□□□ -0.53
VPS13A-204ENST00000376634 OR6T1Q8NGN1 323 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 ADAM19Q9H013 955 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 RAB19A4D1S5 217 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 UPK1BO75841 260 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 IGHG1P01857 330 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 CD63P08962 238 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 KDM1BQ8NB78 822 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 ST7LQ8TDW4 575 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 DPH1Q9BZG8 443 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 ACTR10Q9NZ32 417 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 PCDHGA5Q9Y5G8 931 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 C10orf71Q711Q0 1435 aa11.75□□□□□ -0.53
VPS13A-204ENST00000376634 DENRO43583 198 aaKnown RBP11.74□□□□□ -0.53
VPS13A-204ENST00000376634 SRPX2O60687 465 aaPredicted RBP11.74□□□□□ -0.53
VPS13A-204ENST00000376634 LILRB3O75022 631 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 SLC35E2BP0CK96 405 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 PKLRP30613 574 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 RABEPKQ7Z6M1 372 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 PRR11Q96HE9 360 aaPredicted RBP11.74□□□□□ -0.53
VPS13A-204ENST00000376634 FKRPQ9H9S5 495 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 PCDHA9Q9Y5H5 950 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 CFHP08603 1231 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 ARAFP10398 606 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 GPR176Q14439 515 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 TANGO2Q6ICL3 276 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 IGSF21Q96ID5 467 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 FREM3P0C091 2139 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 UGDHO60701 494 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 SDC3O75056 442 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 RPS18P62269 152 aaKnown RBP11.74□□□□□ -0.53
VPS13A-204ENST00000376634 RAB11AP62491 216 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 FBXW12Q6X9E4 464 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 STEAP2Q8NFT2 490 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 OR5D16Q8NGK9 328 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 FOXRED1Q96CU9 486 aaPredicted RBP11.74□□□□□ -0.53
VPS13A-204ENST00000376634 OR14J1Q9UGF5 321 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 APOA2P02652 100 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 GJA5P36382 358 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 SPINT3P49223 89 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 OPA3Q9H6K4 179 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 CPNE5Q9HCH3 593 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 AJAP1Q9UKB5 411 aaPredicted RBP11.74□□□□□ -0.53
VPS13A-204ENST00000376634 OR5H15A6NDH6 313 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 OR5H14A6NHG9 310 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 OR5H1A6NKK0 313 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 MED6O75586 246 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 DEFA4P12838 97 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 TMEM19Q96HH6 336 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 LRFN5Q96NI6 719 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 UHRF1Q96T88 793 aaPredicted RBP11.74□□□□□ -0.53
VPS13A-204ENST00000376634 PELI2Q9HAT8 420 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 VSX1Q9NZR4 365 aaPredicted RBP11.74□□□□□ -0.53
VPS13A-204ENST00000376634 CA5BQ9Y2D0 317 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 RHBDD3Q9Y3P4 386 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 ANGPTL7O43827 346 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 CBX7O95931 251 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms