RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 PGS1Q32NB8 556 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 VPS26BQ4G0F5 336 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 EXOSC6Q5RKV6 272 aaKnown RBP11.74□□□□□ -0.53
CLCN6-205ENST00000376492 ALKBH2Q6NS38 261 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 PPP4R4Q6NUP7 873 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 PODNL1Q6PEZ8 512 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 TESCQ96BS2 214 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 FAM120BQ96EK7 910 aaKnown RBP11.74□□□□□ -0.53
CLCN6-205ENST00000376492 DTNBP1Q96EV8 351 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 MS4A4EQ96PG1 132 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 REG4Q9BYZ8 158 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 ACTR6Q9GZN1 396 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 WDR55Q9H6Y2 383 aaPredicted RBP11.74□□□□□ -0.53
CLCN6-205ENST00000376492 Q9N2J8 555 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 YAE1D1Q9NRH1 226 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 AIG1Q9NVV5 245 aa11.74□□□□□ -0.53
CLCN6-205ENST00000376492 MRTO4Q9UKD2 239 aaKnown RBP11.74□□□□□ -0.53
CLCN6-205ENST00000376492 RNASET2O00584 256 aaKnown RBP11.73□□□□□ -0.53
CLCN6-205ENST00000376492 SCN2BO60939 215 aa11.73□□□□□ -0.53
CLCN6-205ENST00000376492 IL33O95760 270 aa11.73□□□□□ -0.53
CLCN6-205ENST00000376492 C6orf47O95873 294 aa11.73□□□□□ -0.53
CLCN6-205ENST00000376492 SOD3P08294 240 aa11.73□□□□□ -0.53
CLCN6-205ENST00000376492 PRDX6P30041 224 aa11.73□□□□□ -0.53
CLCN6-205ENST00000376492 CCT3P49368 545 aaKnown RBP11.73□□□□□ -0.53
CLCN6-205ENST00000376492 MNAT1P51948 309 aa11.73□□□□□ -0.53
CLCN6-205ENST00000376492 CLNS1AP54105 237 aaKnown RBP11.73□□□□□ -0.53
CLCN6-205ENST00000376492 EEFSECP57772 596 aaKnown RBP11.73□□□□□ -0.53
CLCN6-205ENST00000376492 ZSCAN26Q16670 478 aa11.73□□□□□ -0.53
CLCN6-205ENST00000376492 MFSD12Q6NUT3 480 aa11.73□□□□□ -0.53
CLCN6-205ENST00000376492 METTL25Q8N6Q8 603 aa11.73□□□□□ -0.53
CLCN6-205ENST00000376492 FAM110BQ8TC76 370 aa11.73□□□□□ -0.53
CLCN6-205ENST00000376492 TSPEARQ8WU66 669 aa11.73□□□□□ -0.53
CLCN6-205ENST00000376492 C16orf58Q96GQ5 468 aa11.73□□□□□ -0.53
CLCN6-205ENST00000376492 CXorf36Q9H7Y0 433 aa11.73□□□□□ -0.53
CLCN6-205ENST00000376492 GIN1Q9NXP7 522 aa11.73□□□□□ -0.53
CLCN6-205ENST00000376492 GPR45Q9Y5Y3 372 aa11.73□□□□□ -0.53
CLCN6-205ENST00000376492 HEATR5AQ86XA9 2040 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 PRSS51A0A1B0GVH4 220 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 GXYLT2A0PJZ3 443 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 OVOL3O00110 214 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 UBDO15205 165 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 CD5LO43866 347 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 GMFGO60234 142 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 FADS1O60427 444 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 TMCC2O75069 709 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 KCNH1O95259 989 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 IFNA2P01563 188 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 TP53P04637 393 aaPredicted RBP11.72□□□□□ -0.53
CLCN6-205ENST00000376492 HMGN2P05204 90 aaKnown RBP11.72□□□□□ -0.53
CLCN6-205ENST00000376492 C8BP07358 591 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 ACP2P11117 423 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 FCGR2AP12318 317 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 IDO1P14902 403 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 PPP3CBP16298 524 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 ACVR1BP36896 505 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 CDKN1AP38936 164 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 PRIM2P49643 509 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 RASSF2P50749 326 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 PSMD4P55036 377 aaKnown RBP11.72□□□□□ -0.53
CLCN6-205ENST00000376492 HBA1P69905 142 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 PHC1P78364 1004 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 DPY19L1Q2PZI1 675 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 SLC9B1Q4ZJI4 515 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 ANXA8L1Q5VT79 327 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 OR4F3Q6IEY1 312 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 MTDHQ86UE4 582 aaKnown RBP11.72□□□□□ -0.53
CLCN6-205ENST00000376492 GGNQ86UU5 652 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 HIPK1Q86Z02 1210 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 FITM2Q8N6M3 262 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 SLC16A11Q8NCK7 471 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 OR56A1Q8NGH5 318 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 OR6K3Q8NGY3 331 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 LILRB1Q8NHL6 650 aaPredicted RBP11.72□□□□□ -0.53
CLCN6-205ENST00000376492 SFXN5Q8TD22 340 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 GPR151Q8TDV0 419 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 TMEM158Q8WZ71 300 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 NEUROG1Q92886 237 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 MOAP1Q96BY2 351 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 C1GALT1C1Q96EU7 318 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 TEX37Q96LM6 180 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 STACQ99469 402 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 EBF4Q9BQW3 602 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 ZNF385DQ9H6B1 395 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 EQTNQ9NQ60 294 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 PLSCR4Q9NRQ2 329 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 ZCCHC3Q9NUD5 404 aaKnown RBP11.72□□□□□ -0.53
CLCN6-205ENST00000376492 GPATCH2Q9NW75 528 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 EMC9Q9Y3B6 208 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 SNX8Q9Y5X2 465 aa11.72□□□□□ -0.53
CLCN6-205ENST00000376492 ABCA1O95477 2261 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 CFLARO15519 480 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 PHF1O43189 567 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-205ENST00000376492 SS18L1O75177 396 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-205ENST00000376492 PLGP00747 810 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-205ENST00000376492 IGHV4-39P01824 125 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 ALOX5P09917 674 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 EIF1AXP47813 144 aaKnown RBP11.71□□□□□ -0.53
CLCN6-205ENST00000376492 RPS3AP61247 264 aaKnown RBP11.71□□□□□ -0.53
CLCN6-205ENST00000376492 UFM1P61960 85 aa11.71□□□□□ -0.53
CLCN6-205ENST00000376492 GANABQ14697 944 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms