RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 ZAR1LA6NP61 321 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 MMP11P24347 488 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 CRHBPP24387 322 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 ELK4P28324 431 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 RFX3P48380 749 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 FOXL2P58012 376 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 GABARAPL2P60520 117 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 IL5RAQ01344 420 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 MAD2L1BPQ15013 274 aaPredicted RBP19.41■□□□□ 0.7
HLA-C-201ENST00000376228 MEP1AQ16819 746 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 HLA-DQA1Q5Y7H0 255 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 ISLR2Q6UXK2 745 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 CCDC71Q8IV32 467 aaPredicted RBP19.41■□□□□ 0.7
HLA-C-201ENST00000376228 ZNF440Q8IYI8 595 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 RNF113BQ8IZP6 322 aaKnown RBP19.41■□□□□ 0.7
HLA-C-201ENST00000376228 LSMEM1Q8N8F7 131 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 CNOT9Q92600 299 aaKnown RBP19.41■□□□□ 0.7
HLA-C-201ENST00000376228 C19orf25Q9UFG5 118 aaPredicted RBP19.41■□□□□ 0.7
HLA-C-201ENST00000376228 LYPD3O95274 346 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 NGFRP08138 427 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 PRG2P13727 222 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 POU2F1P14859 743 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 HTR2AP28223 471 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 ACAA2P42765 397 aaKnown RBP19.41■□□□□ 0.7
HLA-C-201ENST00000376228 CSNK2BP67870 215 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 HOXC5Q00444 222 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 NCF4Q15080 339 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 OR1Q1Q15612 314 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 NNATQ16517 81 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 CRTC2Q53ET0 693 aaPredicted RBP19.41■□□□□ 0.7
HLA-C-201ENST00000376228 FNDC7Q5VTL7 733 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 SHISA6Q6ZSJ9 500 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 DEPDC4Q8N2C3 294 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 ZNF527Q8NB42 609 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 FAM71CQ8NEG0 241 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 OR4C3Q8NH37 302 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 OR8K3Q8NH51 312 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 GNPDA2Q8TDQ7 276 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 TRIM2Q9C040 744 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 FAM192AQ9GZU8 254 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 CTPS2Q9NRF8 586 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 TCFL5Q9UL49 500 aa19.41■□□□□ 0.7
HLA-C-201ENST00000376228 C9J4A7 227 aa19.4■□□□□ 0.7
HLA-C-201ENST00000376228 TSPAN2O60636 221 aa19.4■□□□□ 0.7
HLA-C-201ENST00000376228 TP53P04637 393 aaPredicted RBP19.4■□□□□ 0.7
HLA-C-201ENST00000376228 RAB40ALP0C0E4 278 aa19.4■□□□□ 0.7
HLA-C-201ENST00000376228 TBXA2RP21731 343 aa19.4■□□□□ 0.7
HLA-C-201ENST00000376228 CHMP24386 653 aa19.4■□□□□ 0.7
HLA-C-201ENST00000376228 GSSP48637 474 aa19.4■□□□□ 0.7
HLA-C-201ENST00000376228 PTGES3Q15185 160 aaKnown RBP19.4■□□□□ 0.7
HLA-C-201ENST00000376228 MBOAT2Q6ZWT7 520 aa19.4■□□□□ 0.7
HLA-C-201ENST00000376228 CPEB2Q7Z5Q1 589 aaKnown RBP19.4■□□□□ 0.7
HLA-C-201ENST00000376228 SLC34A3Q8N130 599 aa19.4■□□□□ 0.7
HLA-C-201ENST00000376228 APCDD1LQ8NCL9 501 aa19.4■□□□□ 0.7
HLA-C-201ENST00000376228 WDR77Q9BQA1 342 aaPredicted RBP19.4■□□□□ 0.7
HLA-C-201ENST00000376228 PRSS27Q9BQR3 290 aa19.4■□□□□ 0.7
HLA-C-201ENST00000376228 CRB3Q9BUF7 120 aa19.4■□□□□ 0.7
HLA-C-201ENST00000376228 TMEM27Q9HBJ8 222 aa19.4■□□□□ 0.7
HLA-C-201ENST00000376228 NDUFA13Q9P0J0 144 aa19.4■□□□□ 0.7
HLA-C-201ENST00000376228 GPN3Q9UHW5 284 aaPredicted RBP19.4■□□□□ 0.7
HLA-C-201ENST00000376228 NTNG1Q9Y2I2 539 aa19.4■□□□□ 0.7
HLA-C-201ENST00000376228 PCSK5Q92824 1860 aa19.39■□□□□ 0.69
HLA-C-201ENST00000376228 LOC102723996A0A087X1L8 192 aa19.39■□□□□ 0.69
HLA-C-201ENST00000376228 BCAS1O75363 584 aaPredicted RBP19.39■□□□□ 0.69
HLA-C-201ENST00000376228 CD63P08962 238 aa19.39■□□□□ 0.69
HLA-C-201ENST00000376228 GKN3PP0CG01 181 aa19.39■□□□□ 0.69
HLA-C-201ENST00000376228 OMPP47874 163 aa19.39■□□□□ 0.69
HLA-C-201ENST00000376228 PNLIPRP2P54317 469 aa19.39■□□□□ 0.69
HLA-C-201ENST00000376228 TSPAN31Q12999 210 aa19.39■□□□□ 0.69
HLA-C-201ENST00000376228 ZNF730Q6ZMV8 503 aa19.39■□□□□ 0.69
HLA-C-201ENST00000376228 RRM2BQ7LG56 351 aa19.39■□□□□ 0.69
HLA-C-201ENST00000376228 NKAIN4Q8IVV8 208 aa19.39■□□□□ 0.69
HLA-C-201ENST00000376228 RHOXF1Q8NHV9 184 aa19.39■□□□□ 0.69
HLA-C-201ENST00000376228 NUBPLQ8TB37 319 aa19.39■□□□□ 0.69
HLA-C-201ENST00000376228 PIGXQ8TBF5 258 aa19.39■□□□□ 0.69
HLA-C-201ENST00000376228 VMP1Q96GC9 406 aa19.39■□□□□ 0.69
HLA-C-201ENST00000376228 LPAR4Q99677 370 aa19.39■□□□□ 0.69
HLA-C-201ENST00000376228 EXOSC3Q9NQT5 275 aaKnown RBP19.39■□□□□ 0.69
HLA-C-201ENST00000376228 POLHQ9Y253 713 aa19.39■□□□□ 0.69
HLA-C-201ENST00000376228 HEATR5AQ86XA9 2040 aa19.38■□□□□ 0.69
HLA-C-201ENST00000376228 EXPH5Q8NEV8 1989 aa19.38■□□□□ 0.69
HLA-C-201ENST00000376228 SLC1A7O00341 560 aa19.38■□□□□ 0.69
HLA-C-201ENST00000376228 ANGPTL1O95841 491 aa19.38■□□□□ 0.69
HLA-C-201ENST00000376228 ALDH3B2P48448 385 aa19.38■□□□□ 0.69
HLA-C-201ENST00000376228 RNF4P78317 190 aa19.38■□□□□ 0.69
HLA-C-201ENST00000376228 FAAH2Q6GMR7 532 aa19.38■□□□□ 0.69
HLA-C-201ENST00000376228 PAPD4Q6PIY7 484 aaKnown RBP19.38■□□□□ 0.69
HLA-C-201ENST00000376228 ENTHD1Q8IYW4 607 aa19.38■□□□□ 0.69
HLA-C-201ENST00000376228 ZNF843Q8N446 348 aa19.38■□□□□ 0.69
HLA-C-201ENST00000376228 ZNF614Q8N883 585 aa19.38■□□□□ 0.69
HLA-C-201ENST00000376228 EFHD2Q96C19 240 aaPredicted RBP19.38■□□□□ 0.69
HLA-C-201ENST00000376228 HS6ST2Q96MM7 605 aa19.38■□□□□ 0.69
HLA-C-201ENST00000376228 GAL3ST4Q96RP7 486 aa19.38■□□□□ 0.69
HLA-C-201ENST00000376228 LMF1Q96S06 567 aa19.38■□□□□ 0.69
HLA-C-201ENST00000376228 KRCC1Q9NPI7 259 aaPredicted RBP19.38■□□□□ 0.69
HLA-C-201ENST00000376228 ZNF223Q9UK11 482 aaPredicted RBP19.38■□□□□ 0.69
HLA-C-201ENST00000376228 SLC7A7Q9UM01 511 aa19.38■□□□□ 0.69
HLA-C-201ENST00000376228 KCNMB2Q9Y691 235 aa19.38■□□□□ 0.69
HLA-C-201ENST00000376228 A0A0B4J2E0 115 aa19.37■□□□□ 0.69
HLA-C-201ENST00000376228 A0A1B0GX12 115 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms