RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 SEMA6CQ9H3T2 930 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 KCNE5Q9UJ90 142 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 DIMT1Q9UNQ2 313 aaKnown RBP12.96□□□□□ -0.33
MSH5-202ENST00000375740 RDH16O75452 317 aa12.96□□□□□ -0.34
MSH5-202ENST00000375740 STX11O75558 287 aa12.96□□□□□ -0.34
MSH5-202ENST00000375740 TPPPO94811 219 aa12.96□□□□□ -0.34
MSH5-202ENST00000375740 RAB36O95755 333 aa12.96□□□□□ -0.34
MSH5-202ENST00000375740 PRG2P13727 222 aa12.96□□□□□ -0.34
MSH5-202ENST00000375740 GNSP15586 552 aa12.96□□□□□ -0.34
MSH5-202ENST00000375740 ETV5P41161 510 aa12.96□□□□□ -0.34
MSH5-202ENST00000375740 ETV1P50549 477 aa12.96□□□□□ -0.34
MSH5-202ENST00000375740 CAV3P56539 151 aa12.96□□□□□ -0.34
MSH5-202ENST00000375740 MFSD13AQ14CX5 517 aa12.96□□□□□ -0.34
MSH5-202ENST00000375740 ZBTB37Q5TC79 503 aa12.96□□□□□ -0.34
MSH5-202ENST00000375740 FIGNL1Q6PIW4 674 aa12.96□□□□□ -0.34
MSH5-202ENST00000375740 DGAT2L6Q6ZPD8 337 aa12.96□□□□□ -0.34
MSH5-202ENST00000375740 MBOAT2Q6ZWT7 520 aa12.96□□□□□ -0.34
MSH5-202ENST00000375740 COX18Q8N8Q8 333 aa12.96□□□□□ -0.34
MSH5-202ENST00000375740 TMEM203Q969S6 136 aa12.96□□□□□ -0.34
MSH5-202ENST00000375740 ORAI3Q9BRQ5 295 aa12.96□□□□□ -0.34
MSH5-202ENST00000375740 TEX51A0A1B0GUA7 166 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 ATP6V1G2-DDX39BF2Z307 99 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 PEX12O00623 359 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 APOL3O95236 402 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 THBS1P07996 1170 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 GKN3PP0CG01 181 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 FPR3P25089 353 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 STAT5AP42229 794 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 GAS1P54826 345 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 HNRNPA0Q13151 305 aaKnown RBP12.95□□□□□ -0.34
MSH5-202ENST00000375740 POU4F3Q15319 338 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 SLC36A4Q6YBV0 504 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 C9orf62Q8N4C0 152 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 DEFB119Q8N690 84 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 FAM181AQ8N9Y4 354 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 SLC38A2Q96QD8 506 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 GTPBP2Q9BX10 602 aaKnown RBP12.95□□□□□ -0.34
MSH5-202ENST00000375740 TPSD1Q9BZJ3 242 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 PPIL3Q9H2H8 161 aaKnown RBP12.95□□□□□ -0.34
MSH5-202ENST00000375740 DUSP22Q9NRW4 184 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 PLEKHB1Q9UF11 243 aaPredicted RBP12.95□□□□□ -0.34
MSH5-202ENST00000375740 POMT2Q9UKY4 750 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 GXYLT2A0PJZ3 443 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 MYL12BO14950 172 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 KLF4O43474 513 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 SLC22A5O76082 557 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 CH25HO95992 272 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 DBIP07108 87 aaKnown RBP12.95□□□□□ -0.34
MSH5-202ENST00000375740 MSL3P1P0C860 447 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 GABRA3P34903 492 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 BLKP51451 505 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 RAB38P57729 211 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 RUNX1T1Q06455 604 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 KLHL22Q53GT1 634 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 EIPR1Q53HC9 387 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 TIGD3Q6B0B8 471 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 SLC30A6Q6NXT4 461 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 XKRXQ6PP77 449 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 OR4Q3Q8NH05 313 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 OSTF1Q92882 214 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 RNFT2Q96EX2 444 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 STACQ99469 402 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 LRRC61Q9BV99 259 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 CAPN10Q9HC96 672 aa12.95□□□□□ -0.34
MSH5-202ENST00000375740 SLC9B1P1A6NJY1 282 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 TSPAN4O14817 238 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 PRODHO43272 600 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 CHST10O43529 356 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 RPS4Y1P22090 263 aaKnown RBP12.94□□□□□ -0.34
MSH5-202ENST00000375740 MAZP56270 477 aaKnown RBP12.94□□□□□ -0.34
MSH5-202ENST00000375740 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.94□□□□□ -0.34
MSH5-202ENST00000375740 P2RY14Q15391 338 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 MRPL2Q5T653 305 aaKnown RBP12.94□□□□□ -0.34
MSH5-202ENST00000375740 LIPKQ5VXJ0 399 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 ZCCHC12Q6PEW1 402 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 SYT13Q7L8C5 426 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 PARGQ86W56 976 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 MCATQ8IVS2 390 aaKnown RBP12.94□□□□□ -0.34
MSH5-202ENST00000375740 TOR1AIP2Q8NFQ8 470 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 CTHRC1Q96CG8 243 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 DCLRE1CQ96SD1 692 aaKnown RBP12.94□□□□□ -0.34
MSH5-202ENST00000375740 DIABLOQ9NR28 239 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 IL20Q9NYY1 176 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 NLGN3Q9NZ94 848 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 IL20RAQ9UHF4 553 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 ZNF670-ZNF695F2Z2N8 137 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 FABP7O15540 132 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 SEC14L5O43304 696 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 MAP3K8P41279 467 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 SRSF5Q13243 272 aaKnown RBP12.94□□□□□ -0.34
MSH5-202ENST00000375740 C1DQ13901 141 aaKnown RBP12.94□□□□□ -0.34
MSH5-202ENST00000375740 RANBP3LQ86VV4 465 aaPredicted RBP12.94□□□□□ -0.34
MSH5-202ENST00000375740 AVL9Q8NBF6 648 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 POGLUT1Q8NBL1 392 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 PRSS27Q9BQR3 290 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 AIFM2Q9BRQ8 373 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 RBCK1Q9BYM8 510 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 RACGAP1Q9H0H5 632 aa12.94□□□□□ -0.34
MSH5-202ENST00000375740 MRPS18AQ9NVS2 196 aaKnown RBP12.94□□□□□ -0.34
MSH5-202ENST00000375740 ING3Q9NXR8 418 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms