RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 ANKFN1Q8N957 763 aa13.97□□□□□ -0.17
SDHB-201ENST00000375499 FAM71CQ8NEG0 241 aa13.97□□□□□ -0.17
SDHB-201ENST00000375499 OR2V1Q8NHB1 315 aa13.97□□□□□ -0.17
SDHB-201ENST00000375499 KLHL15Q96M94 604 aa13.97□□□□□ -0.17
SDHB-201ENST00000375499 SRXN1Q9BYN0 137 aa13.97□□□□□ -0.17
SDHB-201ENST00000375499 SAP130Q9H0E3 1048 aa13.97□□□□□ -0.17
SDHB-201ENST00000375499 PIGMQ9H3S5 423 aa13.97□□□□□ -0.17
SDHB-201ENST00000375499 LIME1Q9H400 295 aa13.97□□□□□ -0.17
SDHB-201ENST00000375499 COQ10BQ9H8M1 238 aa13.97□□□□□ -0.17
SDHB-201ENST00000375499 SDR39U1Q9NRG7 319 aaPredicted RBP13.97□□□□□ -0.17
SDHB-201ENST00000375499 EXD2Q9NVH0 621 aa13.97□□□□□ -0.17
SDHB-201ENST00000375499 ZIM2Q9NZV7 527 aa13.97□□□□□ -0.17
SDHB-201ENST00000375499 WDR45Q9Y484 360 aa13.97□□□□□ -0.17
SDHB-201ENST00000375499 TUBAL3A6NHL2 446 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 A6NNC1 897 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 H3BNH8 94 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 UBDO15205 165 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 ADAM11O75078 769 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 SLC22A3O75751 556 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 CYP7B1O75881 506 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 SMNDC1O75940 238 aaKnown RBP eCLIP13.96□□□□□ -0.17
SDHB-201ENST00000375499 H6PDO95479 791 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 UBTFL6P0CB48 400 aaPredicted RBP13.96□□□□□ -0.17
SDHB-201ENST00000375499 ELK4P28324 431 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 PGM1P36871 562 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 PEX19P40855 299 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 MVDP53602 400 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 CHRNEQ04844 493 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 FAM27E3Q08E93 113 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 FGFBP1Q14512 234 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 QPRTQ15274 297 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 MAPK11Q15759 364 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 SGCBQ16585 318 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 TIGD2Q4W5G0 525 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 OR2A2Q6IF42 318 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 ZNF621Q6ZSS3 439 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 ESPNLQ6ZVH7 1005 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 ZNF619Q8N2I2 560 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 GLB1L3Q8NCI6 653 aaPredicted RBP13.96□□□□□ -0.17
SDHB-201ENST00000375499 OR5W2Q8NH69 310 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 LRRC8CQ8TDW0 803 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 FAM222BQ8WU58 562 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 VPS33AQ96AX1 596 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 AURKBQ96GD4 344 aaPredicted RBP13.96□□□□□ -0.17
SDHB-201ENST00000375499 ZBTB18Q99592 522 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 LAT2Q9GZY6 243 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 SLC38A1Q9H2H9 487 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 HHATLQ9HCP6 504 aa13.96□□□□□ -0.17
SDHB-201ENST00000375499 FREM1Q5H8C1 2179 aa13.96□□□□□ -0.18
SDHB-201ENST00000375499 PRR14LQ5THK1 2151 aa13.96□□□□□ -0.18
SDHB-201ENST00000375499 ETV2O00321 342 aaPredicted RBP13.95□□□□□ -0.18
SDHB-201ENST00000375499 MSTNO14793 375 aa13.95□□□□□ -0.18
SDHB-201ENST00000375499 EIF4E2O60573 245 aaKnown RBP13.95□□□□□ -0.18
SDHB-201ENST00000375499 DNAJA2O60884 412 aa13.95□□□□□ -0.18
SDHB-201ENST00000375499 CSTAP01040 98 aa13.95□□□□□ -0.18
SDHB-201ENST00000375499 CRHP06850 196 aa13.95□□□□□ -0.18
SDHB-201ENST00000375499 GSTA3Q16772 222 aa13.95□□□□□ -0.18
SDHB-201ENST00000375499 GPAT3Q53EU6 434 aa13.95□□□□□ -0.18
SDHB-201ENST00000375499 SLC25A53Q5H9E4 307 aa13.95□□□□□ -0.18
SDHB-201ENST00000375499 ATAD3BQ5T9A4 648 aa13.95□□□□□ -0.18
SDHB-201ENST00000375499 HBMQ6B0K9 141 aa13.95□□□□□ -0.18
SDHB-201ENST00000375499 LILRA2Q8N149 483 aa13.95□□□□□ -0.18
SDHB-201ENST00000375499 ATP6V1C2Q8NEY4 427 aa13.95□□□□□ -0.18
SDHB-201ENST00000375499 ZFP90Q8TF47 636 aa13.95□□□□□ -0.18
SDHB-201ENST00000375499 ROBO4Q8WZ75 1007 aa13.95□□□□□ -0.18
SDHB-201ENST00000375499 LRRC46Q96FV0 321 aa13.95□□□□□ -0.18
SDHB-201ENST00000375499 THUMPD3Q9BV44 507 aaKnown RBP13.95□□□□□ -0.18
SDHB-201ENST00000375499 RASSF1Q9NS23 344 aa13.95□□□□□ -0.18
SDHB-201ENST00000375499 DNAJB12Q9NXW2 375 aaKnown RBP13.95□□□□□ -0.18
SDHB-201ENST00000375499 GPC6Q9Y625 555 aaPredicted RBP13.95□□□□□ -0.18
SDHB-201ENST00000375499 A0A1W2PNR3 127 aa13.94□□□□□ -0.18
SDHB-201ENST00000375499 A0A1W2PPR1 153 aa13.94□□□□□ -0.18
SDHB-201ENST00000375499 RFXANKO14593 260 aa13.94□□□□□ -0.18
SDHB-201ENST00000375499 GUSBP08236 651 aa13.94□□□□□ -0.18
SDHB-201ENST00000375499 EPXP11678 715 aa13.94□□□□□ -0.18
SDHB-201ENST00000375499 HOXB9P17482 250 aaPredicted RBP13.94□□□□□ -0.18
SDHB-201ENST00000375499 ME2P23368 584 aa13.94□□□□□ -0.18
SDHB-201ENST00000375499 ADH6P28332 368 aa13.94□□□□□ -0.18
SDHB-201ENST00000375499 EIF1P41567 113 aaKnown RBP13.94□□□□□ -0.18
SDHB-201ENST00000375499 IDH3AP50213 366 aa13.94□□□□□ -0.18
SDHB-201ENST00000375499 CBFBQ13951 182 aa13.94□□□□□ -0.18
SDHB-201ENST00000375499 ZNF239Q16600 458 aaKnown RBP13.94□□□□□ -0.18
SDHB-201ENST00000375499 TMEM176BQ3YBM2 270 aaPredicted RBP13.94□□□□□ -0.18
SDHB-201ENST00000375499 AP1ARQ63HQ0 302 aa13.94□□□□□ -0.18
SDHB-201ENST00000375499 HDXQ7Z353 690 aa13.94□□□□□ -0.18
SDHB-201ENST00000375499 KIF18BQ86Y91 864 aa13.94□□□□□ -0.18
SDHB-201ENST00000375499 ZNF610Q8N9Z0 462 aa13.94□□□□□ -0.18
SDHB-201ENST00000375499 OSTF1Q92882 214 aa13.94□□□□□ -0.18
SDHB-201ENST00000375499 MRGPRX4Q96LA9 322 aa13.94□□□□□ -0.18
SDHB-201ENST00000375499 CLEC4MQ9H2X3 399 aaPredicted RBP13.94□□□□□ -0.18
SDHB-201ENST00000375499 TCF7L2Q9NQB0 619 aa13.94□□□□□ -0.18
SDHB-201ENST00000375499 POLE3Q9NRF9 147 aa13.94□□□□□ -0.18
SDHB-201ENST00000375499 MAP1AP78559 2803 aaPredicted RBP13.94□□□□□ -0.18
SDHB-201ENST00000375499 SIAH2O43255 324 aa13.93□□□□□ -0.18
SDHB-201ENST00000375499 SS18L1O75177 396 aaPredicted RBP13.93□□□□□ -0.18
SDHB-201ENST00000375499 AGR2O95994 175 aa13.93□□□□□ -0.18
SDHB-201ENST00000375499 IL6P05231 212 aa13.93□□□□□ -0.18
SDHB-201ENST00000375499 FCGR2AP12318 317 aa13.93□□□□□ -0.18
SDHB-201ENST00000375499 ETFAP13804 333 aa13.93□□□□□ -0.18
SDHB-201ENST00000375499 RPS4Y1P22090 263 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms