RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 GPR32P1Q8NGA4 272 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 OR1J4Q8NGS1 313 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 OR13C6PQ8NH95 151 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 CA5BP1Q8WTZ4 195 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 RAB37Q96AX2 223 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 PRRC1Q96M27 445 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 UROC1Q96N76 676 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 TAAR9Q96RI9 348 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 GBA3Q9H227 469 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 SEMA6BQ9H3T3 888 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 ABHD16BQ9H3Z7 469 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 ACP6Q9NPH0 428 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 BEX4Q9NWD9 120 aaPredicted RBP4.38□□□□□ -1.71
SCN1A-202ENST00000375405 GLTPQ9NZD2 209 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 SLC7A8Q9UHI5 535 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 VDAC3Q9Y277 283 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 WASHC3Q9Y3C0 194 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 MAB21L2Q9Y586 359 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 PALLDQ8WX93 1383 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 TEX50A0A1B0GTY4 177 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 DIRAS1O95057 198 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 NXPH2O95156 264 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 THBS1P07996 1170 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 APEHP13798 732 aaKnown RBP4.38□□□□□ -1.71
SCN1A-202ENST00000375405 CD200P41217 278 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 PTH2RP49190 550 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 KCNAB1Q14722 419 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 EARS2Q5JPH6 523 aaKnown RBP4.38□□□□□ -1.71
SCN1A-202ENST00000375405 MORN1Q5T089 497 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 LBX2Q6XYB7 198 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 TRABD2AQ86V40 505 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 SERPINA9Q86WD7 417 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 SLC15A3Q8IY34 581 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 ARL14EPQ8N8R7 260 aaPredicted RBP4.38□□□□□ -1.71
SCN1A-202ENST00000375405 OR56A3Q8NH54 315 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 ELMOD3Q96FG2 381 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 SNX22Q96L94 193 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 LURAP1Q96LR2 239 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 SLC38A1Q9H2H9 487 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 AKTIPQ9H8T0 292 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 UGT1A8Q9HAW9 530 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 HHATLQ9HCP6 504 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 U3KQ87 197 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 ATP10BO94823 1461 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 QRICH2Q9H0J4 1663 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 A0A0A6YYJ9 748 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 RNF212BA8MTL3 300 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 SNNO75324 88 aaPredicted RBP4.38□□□□□ -1.71
SCN1A-202ENST00000375405 LYPLA1O75608 230 aaPredicted RBP4.38□□□□□ -1.71
SCN1A-202ENST00000375405 ORM1P02763 201 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 GBAP04062 536 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 NDST2P52849 883 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 LIMK2P53671 638 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 DLX1P56177 255 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 IFI44LQ53G44 452 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 EGFLAMQ63HQ2 1017 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 OR10K2Q6IF99 312 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 OR2W3Q7Z3T1 314 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 MOB3BQ86TA1 216 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 ADAMTS18Q8TE60 1221 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 FAM46BQ96A09 425 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 TSSK2Q96PF2 358 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 OR8B4Q96RC9 309 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 KCNA7Q96RP8 456 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 ACO2Q99798 780 aaKnown RBP4.38□□□□□ -1.71
SCN1A-202ENST00000375405 CRB3Q9BUF7 120 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 TGIF2Q9GZN2 237 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 RAB6CQ9H0N0 254 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 ZNF395Q9H8N7 513 aaPredicted RBP4.38□□□□□ -1.71
SCN1A-202ENST00000375405 MTHFD2LQ9H903 347 aaPredicted RBP4.38□□□□□ -1.71
SCN1A-202ENST00000375405 GALNT9Q9HCQ5 603 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 HEYLQ9NQ87 328 aaPredicted RBP4.38□□□□□ -1.71
SCN1A-202ENST00000375405 ZNF446Q9NWS9 450 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 FCF1Q9Y324 198 aaKnown RBP4.38□□□□□ -1.71
SCN1A-202ENST00000375405 HS3ST1O14792 307 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 PLSCR1O15162 318 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 PLRG1O43660 514 aaKnown RBP4.38□□□□□ -1.71
SCN1A-202ENST00000375405 RAD1O60671 282 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 EIF1BO60739 113 aaKnown RBP4.38□□□□□ -1.71
SCN1A-202ENST00000375405 APBB3O95704 486 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 PF4P02776 101 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 TFP02787 698 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 CDK1P06493 297 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 HOXC6P09630 235 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 PIPP12273 146 aaPredicted RBP4.38□□□□□ -1.71
SCN1A-202ENST00000375405 TCN2P20062 427 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 CD34P28906 385 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 GABRA5P31644 462 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 CSKP41240 450 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 MARCKSL1P49006 195 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 RAB10P61026 200 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 SOX4Q06945 474 aaPredicted RBP4.38□□□□□ -1.71
SCN1A-202ENST00000375405 YIF1BQ5BJH7 314 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 EEF1DP3Q658K8 133 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 PODNL1Q6PEZ8 512 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 SLC5A8Q8N695 610 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 OR52R1Q8NGF1 315 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 ANKRD9Q96BM1 317 aaPredicted RBP4.38□□□□□ -1.71
SCN1A-202ENST00000375405 CHFRQ96EP1 664 aa4.38□□□□□ -1.71
SCN1A-202ENST00000375405 MBOAT7Q96N66 472 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms