RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 PMPCBO75439 489 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 C8AP07357 584 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 COX7A2P14406 83 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 MRPS11P82912 194 aaKnown RBP8.35□□□□□ -1.07
UBR4-201ENST00000375218 IL5RAQ01344 420 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 PTGR1Q14914 329 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 TAB1Q15750 504 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 LRRC8EQ6NSJ5 796 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 LIPIQ6XZB0 460 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 HFE2Q6ZVN8 426 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 ARCQ7LC44 396 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 SMG8Q8ND04 991 aaKnown RBP8.35□□□□□ -1.07
UBR4-201ENST00000375218 TFAP2BQ92481 460 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 NICN1Q9BSH3 213 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 TRMT61BQ9BVS5 477 aaKnown RBP8.35□□□□□ -1.07
UBR4-201ENST00000375218 C2orf78A6NCI8 922 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 FAM25AB3EWG3 89 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 FAM25CB3EWG5 89 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 FAM25GB3EWG6 89 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 MKRN2OSH3BPM6 223 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 PDHXO00330 501 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 HCRTO43612 131 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 MOSPD3O75425 235 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 OR2J2O76002 312 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 CBX6O95503 412 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 CST1P01037 141 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 ATP1A1P05023 1023 aaKnown RBP8.35□□□□□ -1.07
UBR4-201ENST00000375218 NR4A2P43354 598 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 CDH12P55289 794 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 BNIP3Q12983 259 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 SPRYD7Q5W111 196 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 MBOAT1Q6ZNC8 495 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 C17orf107Q6ZR85 190 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 CENPUQ71F23 418 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 GABRG1Q8N1C3 465 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 ATOH1Q92858 354 aaPredicted RBP8.35□□□□□ -1.07
UBR4-201ENST00000375218 GPR174Q9BXC1 333 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 SLC46A2Q9BY10 475 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 EPHX3Q9H6B9 360 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 PPP1R3EQ9H7J1 279 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 TMBIM4Q9HC24 238 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 ING3Q9NXR8 418 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 PLXNA3P51805 1871 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 S100A8P05109 93 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 NBEAP1P0C6P0 100 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 SLC2A4P14672 509 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 CYLC1P35663 651 aaPredicted RBP8.35□□□□□ -1.07
UBR4-201ENST00000375218 JAK3P52333 1124 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 TAS2R39P59534 338 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 FAM3AP98173 230 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 PCOLCEQ15113 449 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 NKG7Q16617 165 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 TRNP1Q6NT89 227 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 C11orf63Q6NUN7 778 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 AADACL2Q6P093 401 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 CREB3L2Q70SY1 520 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 TRMT1LQ7Z2T5 733 aaKnown RBP8.35□□□□□ -1.07
UBR4-201ENST00000375218 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.35□□□□□ -1.07
UBR4-201ENST00000375218 CSNK1A1LQ8N752 337 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 OR9G4Q8NGQ1 327 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 OR2V1Q8NHB1 315 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 NETO1Q8TDF5 533 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 CNOT9Q92600 299 aaKnown RBP8.35□□□□□ -1.07
UBR4-201ENST00000375218 AMDHD1Q96NU7 426 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 TMEM209Q96SK2 561 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 DUSP16Q9BY84 665 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 TPSD1Q9BZJ3 242 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 MYNNQ9NPC7 610 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 GPR27Q9NS67 375 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 A0A1W2PQJ5 194 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 CDC7O00311 574 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 CD22P20273 847 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 LIPAP38571 399 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 ADORA2A-AS1P86434 159 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 SLC10A7Q0GE19 358 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 AHSA2Q719I0 299 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 DNAJC9Q8WXX5 260 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 FAM210BQ96KR6 192 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 INSM2Q96T92 566 aaPredicted RBP8.34□□□□□ -1.07
UBR4-201ENST00000375218 SLC28A3Q9HAS3 691 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 CCDC59Q9P031 241 aaKnown RBP8.34□□□□□ -1.07
UBR4-201ENST00000375218 FADS1O60427 444 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 CYP7B1O75881 506 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 IFNA2P01563 188 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 GLB1P16278 677 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 COPZ1P61923 177 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 SLC34A1Q06495 639 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 CD69Q07108 199 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 ITGA9Q13797 1035 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 CATSPEREQ5SY80 951 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 TSTD2Q5T7W7 516 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 RAX2Q96IS3 184 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 POM121L2Q96KW2 1035 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 MED18Q9BUE0 208 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 SDCBP2Q9H190 292 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 C20orf141Q9NUB4 165 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 PLEKHJ1Q9NW61 149 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 TREM2Q9NZC2 230 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 SLC7A11Q9UPY5 501 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 MAGEB17A8MXT2 336 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms