RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 RFKQ969G6 155 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 LGALS12Q96DT0 336 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 CLIP3Q96DZ5 547 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 PLEKHA8Q96JA3 519 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 CCDC74BQ96LY2 380 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 OR5M11Q96RB7 305 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 OR6C1Q96RD1 312 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 MGLLQ99685 303 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 RPS6KB2Q9UBS0 482 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 RARRES3Q9UL19 164 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 SIGLEC7Q9Y286 467 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 C2orf92A0A1B0GVN3 265 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 EFCAB9A8MZ26 197 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 BHLHE40O14503 412 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 AIREO43918 545 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 HCN1O60741 890 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 INHBBP09529 407 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 ATXN8OSP0DMR3 200 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 PTNP21246 168 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 UGT2B10P36537 528 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 GPR143P51810 404 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 VBP1P61758 197 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 PSPHP78330 225 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 DCTN2Q13561 401 aaKnown RBP16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 C9orf40Q8IXQ3 194 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 LNX2Q8N448 690 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 NANOGP1Q8N7R0 232 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 NDNFQ8TB73 568 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 DYNC2LI1Q8TCX1 351 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 RPL3LQ92901 407 aaKnown RBP16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 TAPBPLQ9BX59 468 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 SLC7A5P2Q9GIP4 190 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 FN3KQ9H479 309 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 COPS7AQ9UBW8 275 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 GPR52Q9Y2T5 361 aa16.54■□□□□ 0.24
HLA-DQB1-201ENST00000374943 M0R3G1 203 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 KPNA4O00629 521 aaPredicted RBP16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 SCDO00767 359 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 CSO75390 466 aaKnown RBP16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 RFPL3O75679 317 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 UTS2O95399 124 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 BMP7P18075 431 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 GADD45AP24522 165 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 MTNR1AP48039 350 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 LIMK1P53667 647 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 NCS1P62166 190 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 MED22Q15528 200 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 MOGQ16653 247 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 NXNL2Q5VZ03 156 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 SMARCD3Q6STE5 483 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 HSDL2Q6YN16 418 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 LAPTM4BQ86VI4 370 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 SLC34A3Q8N130 599 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 ZNF441Q8N8Z8 693 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 C17orf47Q8NEP4 570 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 IFI44Q8TCB0 444 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 STT3BQ8TCJ2 826 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 ARSGQ96EG1 525 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 RNFT2Q96EX2 444 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 WWTR1Q9GZV5 400 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 ICAM5Q9UMF0 924 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 PCDHGA3Q9Y5H0 932 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 A0A087WUJ7 227 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 CCRL2O00421 344 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 ARHGAP33O14559 1287 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 PTP4A3O75365 173 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 SCRG1O75711 98 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 SCG5P05408 212 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 NGFRP08138 427 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 HBQ1P09105 142 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 UBL4AP11441 157 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 DUSP3P51452 185 aaPredicted RBP16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 CDH11P55287 796 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 COPZ1P61923 177 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 LSM3P62310 102 aaKnown RBP16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 SKP2Q13309 424 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 NDUFAF6Q330K2 333 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 NKAIN1Q4KMZ8 207 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 PRSS58Q8IYP2 241 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 CADM2Q8N3J6 435 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 TMEM105Q8N8V8 129 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 DTWD2Q8NBA8 298 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 OR13C2Q8NGS9 318 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 OPALINQ96PE5 141 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 CLEC2DQ9UHP7 191 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 BAIAP2Q9UQB8 552 aa16.53■□□□□ 0.24
HLA-DQB1-201ENST00000374943 HTR3EA5X5Y0 456 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PATE3B3GLJ2 98 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 TIAF1O95411 115 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 CH25HO95992 272 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SAGP10523 405 aaPredicted RBP16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 HPGDP15428 266 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 FUT1P19526 365 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ENDOUP21128 410 aaKnown RBP16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 HTR1FP30939 366 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 MLLT10P55197 1068 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 TUBA1BP68363 451 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 DOC2BQ14184 412 aa16.52■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SPHARQ15513 63 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms