RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 PDE7BQ9NP56 450 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 OR6C2Q9NZP2 312 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 NAALAD2Q9Y3Q0 740 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 MROH6A6NGR9 719 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 A6NLC8 198 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 RPS17P08708 135 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 POLR2HP52434 150 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 MEF2DQ14814 521 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 KCNJ8Q15842 424 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 B3GNT8Q7Z7M8 397 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 LRRC28Q86X40 367 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 FRZBQ92765 325 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 TOMM40LQ969M1 308 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 OR2M2Q96R28 347 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 TUBG2Q9NRH3 451 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 IL37Q9NZH6 218 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 ATG4BQ9Y4P1 393 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 IL1AP01583 271 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 GJA4P35212 333 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 SLC6A11P48066 632 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 DLX2Q07687 328 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 BATFQ16520 125 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 ACSM3Q53FZ2 586 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 ZNF695Q8IW36 515 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 WDSUB1Q8N9V3 476 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 CYB561A3Q8NBI2 242 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 OR51T1Q8NGJ9 327 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 ADAMTS14Q8WXS8 1223 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 PTTG3PQ9NZH4 202 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 TSTD3H0UI37 97 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 GIFP27352 417 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 SGSHP51688 502 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 ZNF136P52737 540 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 LARP4Q71RC2 724 aaKnown RBP eCLIP11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 PGBD5Q8N414 524 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 SPATA6Q9NWH7 488 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 HSBP1L1C9JCN9 74 aa11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 RAC2P15153 192 aa11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 ZNF585AQ6P3V2 769 aa11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 RCBTB1Q8NDN9 531 aa11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 FNDC9Q8TBE3 224 aa11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 DOK4Q8TEW6 326 aa11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 MYLIPQ8WY64 445 aa11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 TSACCQ96A04 125 aaPredicted RBP11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 TSPAN10Q9H1Z9 355 aaPredicted RBP11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 GPR34Q9UPC5 381 aa11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 MGAMO43451 1857 aa11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 CRTAPO75718 401 aaPredicted RBP11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 MPIG6BO95866 241 aa11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 EGFP01133 1207 aa11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 FBXO45P0C2W1 286 aa11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 CD1EP15812 388 aa11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 SDC1P18827 310 aa11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 RPS5P46782 204 aaKnown RBP11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 HNRNPKP61978 463 aaKnown RBP eCLIP11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 PEA15Q15121 130 aa11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 FCRLBQ6BAA4 426 aa11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 CMTM1Q8IZ96 169 aa11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 NOX3Q9HBY0 568 aa11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 OBP2AQ9NY56 170 aa11.52□□□□□ -0.56
NPLOC4-202ENST00000374747 DCDC2BA2VCK2 349 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 TRIM64BA6NI03 449 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 LILRB5O75023 590 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 SCGB2A1O75556 95 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 MT-CO2P00403 227 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 FOSL1P15407 271 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 SLC5A2P31639 672 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 NUDT1P36639 197 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 DUSP3P51452 185 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 FXYD4P59646 89 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 RPS27AP62979 156 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 UBA52P62987 128 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 PSPHP78330 225 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 MLLT11Q13015 90 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 RAET1LQ5VY80 246 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 RSPO2Q6UXX9 243 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 CIDECQ96AQ7 238 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 ELP4Q96EB1 424 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 A0A0U1RQS6 177 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 LCMT2O60294 686 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 CTGFP29279 349 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 SHC2P98077 582 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 GPR50Q13585 617 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 GPR137CQ8N3F9 429 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 C12orf45Q8N5I9 185 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 OR7G3Q8NG95 312 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 THAP3Q8WTV1 239 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 SLC25A18Q9H1K4 315 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 CCL26Q9Y258 94 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 RASD1Q9Y272 281 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 RLFQ13129 1914 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 GMDSO60547 372 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 HTR3BO95264 441 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 MT-ND4P03905 459 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 SSTR2P30874 369 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 EIF2DP41214 584 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 C1orf61Q13536 156 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 TSSK4Q6SA08 328 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 SVBPQ8N300 66 aa11.52□□□□□ -0.57
NPLOC4-202ENST00000374747 OR5L2Q8NGL0 311 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms