RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 SGCEO43556 437 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 SLC19A2O60779 497 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 EFCAB14O75071 495 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 ECDO95905 644 aaPredicted RBP16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 CELP19835 753 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 MAP4K2Q12851 820 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 TPBGQ13641 420 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 FGD2Q7Z6J4 655 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 NR2C2APQ86WQ0 139 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 MARCH9Q86YJ5 346 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 TMEFF1Q8IYR6 380 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 KRT78Q8N1N4 520 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 OR52N1Q8NH53 320 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 OR1S1Q8NH92 325 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 COL26A1Q96A83 441 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 OTULINQ96BN8 352 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 C10orf90Q96M02 699 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 RNF32Q9H0A6 362 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 DNTTIP1Q9H147 329 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 NTNG1Q9Y2I2 539 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 ENPP4Q9Y6X5 453 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 PLSCR5A0PG75 271 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 H0Y8X5 98 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 HMGN4O00479 90 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 GJA4P35212 333 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 CCR6P51684 374 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 CLDN2P57739 230 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 SWI5Q1ZZU3 235 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 SYT14P1Q58G82 188 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 IDNKQ5T6J7 187 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 REEP3Q6NUK4 255 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 TCTN3Q6NUS6 607 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 LYPD4Q6UWN0 246 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 DCUN1D3Q8IWE4 304 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 CACNG6Q9BXT2 260 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 CHIAQ9BZP6 476 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 SEC14L3Q9UDX4 400 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 CORO2BQ9UQ03 480 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 CLCA2Q9UQC9 943 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 ANGPT4Q9Y264 503 aa16.09■□□□□ 0.17
LDLRAP1-201ENST00000374338 TRABD2BA6NFA1 517 aa16.08■□□□□ 0.17
LDLRAP1-201ENST00000374338 ARAFP10398 606 aa16.08■□□□□ 0.17
LDLRAP1-201ENST00000374338 OSMP13725 252 aa16.08■□□□□ 0.17
LDLRAP1-201ENST00000374338 RAB3BP20337 219 aa16.08■□□□□ 0.17
LDLRAP1-201ENST00000374338 PPIBP23284 216 aaKnown RBP16.08■□□□□ 0.17
LDLRAP1-201ENST00000374338 BUD31P41223 144 aaPredicted RBP16.08■□□□□ 0.17
LDLRAP1-201ENST00000374338 TFF2Q03403 129 aa16.08■□□□□ 0.17
LDLRAP1-201ENST00000374338 ZNF528Q3MIS6 628 aa16.08■□□□□ 0.17
LDLRAP1-201ENST00000374338 C9orf50Q5SZB4 431 aa16.08■□□□□ 0.17
LDLRAP1-201ENST00000374338 OR5K2Q8NHB8 316 aa16.08■□□□□ 0.17
LDLRAP1-201ENST00000374338 GEMIN6Q8WXD5 167 aaKnown RBP16.08■□□□□ 0.17
LDLRAP1-201ENST00000374338 TREX2Q9BQ50 279 aaPredicted RBP16.08■□□□□ 0.17
LDLRAP1-201ENST00000374338 MS4A8Q9BY19 250 aa16.08■□□□□ 0.17
LDLRAP1-201ENST00000374338 SPRTNQ9H040 489 aaPredicted RBP16.08■□□□□ 0.17
LDLRAP1-201ENST00000374338 OR51I1Q9H343 314 aa16.08■□□□□ 0.17
LDLRAP1-201ENST00000374338 SEMA3GQ9NS98 782 aa16.08■□□□□ 0.17
LDLRAP1-201ENST00000374338 ZCCHC3Q9NUD5 404 aaKnown RBP16.08■□□□□ 0.17
LDLRAP1-201ENST00000374338 NKIRAS2Q9NYR9 191 aa16.08■□□□□ 0.17
LDLRAP1-201ENST00000374338 MDC1Q14676 2089 aaKnown RBP16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 KAT7O95251 611 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 ACAA1P09110 424 aaPredicted RBP16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 DMDP11532 3685 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 WNT4P56705 351 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 SERTAD2Q14140 314 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 IRF4Q15306 451 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 ZSWIM7Q19AV6 140 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 SLC36A2Q495M3 483 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 VITQ6UXI7 678 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 RAB11FIP2Q7L804 512 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 OR4N5Q8IXE1 308 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 OR14C36Q8NHC7 312 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 NEIL3Q8TAT5 605 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 ZDHHC1Q8WTX9 485 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 OTUB2Q96DC9 234 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 PPP1R16AQ96I34 528 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 SIRT3Q9NTG7 399 aaPredicted RBP16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 ERI3O43414 337 aaKnown RBP16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 SIX6O95475 246 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 NFATC1O95644 943 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 EML2O95834 649 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 RB1P06400 928 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 DRD5P21918 477 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 AK4P27144 223 aaPredicted RBP16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 CALCRP30988 508 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 GABRA5P31644 462 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 NCBP2P52298 156 aaKnown RBP eCLIP16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 ZNF791Q3KP31 576 aaPredicted RBP16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 FAM27D1Q5T7N8 215 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 GPR135Q8IZ08 494 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 KAT2AQ92830 837 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 SMARCD2Q92925 531 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 UBL7Q96S82 380 aaPredicted RBP16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 AIF1LQ9BQI0 150 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 FAM83CQ9BQN1 747 aa16.08■□□□□ 0.16
LDLRAP1-201ENST00000374338 GNB5O14775 395 aa16.07■□□□□ 0.16
LDLRAP1-201ENST00000374338 LINC01565O15544 149 aa16.07■□□□□ 0.16
LDLRAP1-201ENST00000374338 NDUFS4O43181 175 aa16.07■□□□□ 0.16
LDLRAP1-201ENST00000374338 SDC3O75056 442 aa16.07■□□□□ 0.16
LDLRAP1-201ENST00000374338 DNAJB6O75190 326 aa16.07■□□□□ 0.16
LDLRAP1-201ENST00000374338 EIF3GO75821 320 aaKnown RBP eCLIP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms