RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CTDSP2O14595 271 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 TP53I11O14683 189 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 HNF4GQ14541 408 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 EXOSC6Q5RKV6 272 aaKnown RBP14.4□□□□□ -0.1
COL5A1-201ENST00000371817 LRRC25Q8N386 305 aaPredicted RBP14.4□□□□□ -0.1
COL5A1-201ENST00000371817 DTWD1Q8N5C7 304 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 OR4K5Q8NGD3 323 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 NETO1Q8TDF5 533 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 ATP13A2Q9NQ11 1180 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 FBXO8Q9NRD0 319 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 DCTN6O00399 190 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 GABRPO00591 440 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 ITGB5P18084 799 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 HOXD11P31277 338 aaPredicted RBP14.4□□□□□ -0.1
COL5A1-201ENST00000371817 CLINT1Q14677 625 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 KLHDC8BQ8IXV7 354 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 GPR26Q8NDV2 337 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 ARSGQ96EG1 525 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 SENP5Q96HI0 755 aaPredicted RBP14.4□□□□□ -0.1
COL5A1-201ENST00000371817 SAMD8Q96LT4 415 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 NSUN5Q96P11 429 aaKnown RBP14.4□□□□□ -0.1
COL5A1-201ENST00000371817 ATRNO75882 1429 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 ARV1Q9H2C2 271 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 C19orf25Q9UFG5 118 aaPredicted RBP14.4□□□□□ -0.1
COL5A1-201ENST00000371817 PGAP2Q9UHJ9 254 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 SLC2A1P11166 492 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 RPS26P62854 115 aaKnown RBP14.4□□□□□ -0.1
COL5A1-201ENST00000371817 CLDN19Q8N6F1 224 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 LMX1AQ8TE12 382 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 TFGQ92734 400 aaPredicted RBP14.4□□□□□ -0.1
COL5A1-201ENST00000371817 RTTNQ86VV8 2226 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 SYN3O14994 580 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 SYNGR4O95473 234 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 C21orf33P30042 268 aaPredicted RBP14.4□□□□□ -0.1
COL5A1-201ENST00000371817 GRIK5Q16478 980 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 LYSMD2Q8IV50 215 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 ANKRD9Q96BM1 317 aaPredicted RBP14.4□□□□□ -0.1
COL5A1-201ENST00000371817 NMNAT1Q9HAN9 279 aaPredicted RBP14.4□□□□□ -0.1
COL5A1-201ENST00000371817 TRIP12Q14669 1992 aaPredicted RBP14.4□□□□□ -0.1
COL5A1-201ENST00000371817 CHEK1O14757 476 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 PPP1R3DO95685 299 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 RAF1P04049 648 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 NTF3P20783 257 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 GABRR1P24046 479 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 MEP1BQ16820 701 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 KCTD11Q693B1 232 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 NDUFAF7Q7L592 441 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 CPOQ8IVL8 374 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 SIGLEC10Q96LC7 697 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 SLC2A13Q96QE2 648 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 NAA11Q9BSU3 229 aaPredicted RBP14.4□□□□□ -0.1
COL5A1-201ENST00000371817 SORBS1Q9BX66 1292 aaKnown RBP14.4□□□□□ -0.1
COL5A1-201ENST00000371817 BCO1Q9HAY6 547 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 GLO1Q04760 184 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 ARSIQ5FYB1 569 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 PET117Q6UWS5 81 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 CADM3Q8N126 398 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 NUDT9Q9BW91 350 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 PDZD7Q9H5P4 517 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 TLE6Q9H808 572 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 SEMA4GQ9NTN9 838 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 VSTM2BA6NLU5 285 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 GPR39O43194 453 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 ZNF207O43670 478 aaKnown RBP14.39□□□□□ -0.11
COL5A1-201ENST00000371817 KLF8O95600 359 aaPredicted RBP14.39□□□□□ -0.11
COL5A1-201ENST00000371817 AK1P00568 194 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 RAB11AP62491 216 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 SLC25A32Q9H2D1 315 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 POFUT1Q9H488 388 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 ADARB2Q9NS39 739 aaKnown RBP14.39□□□□□ -0.11
COL5A1-201ENST00000371817 KIAA0355O15063 1070 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 MMP3P08254 477 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 ZNF30P17039 623 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 SRPXP78539 464 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 ACSM1Q08AH1 577 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.39□□□□□ -0.11
COL5A1-201ENST00000371817 SFXN2Q96NB2 322 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 KCNK12Q9HB15 430 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 SIX2Q9NPC8 291 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 EXOSC3Q9NQT5 275 aaKnown RBP14.39□□□□□ -0.11
COL5A1-201ENST00000371817 NLE1Q9NVX2 485 aaPredicted RBP14.39□□□□□ -0.11
COL5A1-201ENST00000371817 VWDEQ8N2E2 1590 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 PHOX2AO14813 284 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 MTX2O75431 263 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 PAFAH1B3Q15102 231 aaKnown RBP14.39□□□□□ -0.11
COL5A1-201ENST00000371817 AMZ1Q400G9 498 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 UNC5DQ6UXZ4 953 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 SERPINA11Q86U17 422 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 KIAA1143Q96AT1 154 aaPredicted RBP14.39□□□□□ -0.11
COL5A1-201ENST00000371817 HCAR1Q9BXC0 346 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 CLDN7O95471 211 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 SCNN1AP37088 669 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 CSKP41240 450 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 GRM2Q14416 872 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 P2RY14Q15391 338 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 NRMQ8IXM6 262 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 CDS1Q92903 461 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 LCN6P62502 163 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 CPNE8Q86YQ8 564 aa14.39□□□□□ -0.11
COL5A1-201ENST00000371817 SFT2D1Q8WV19 159 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms