RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 TP53TG5Q9Y2B4 290 aa20.77■□□□□ 0.91
TM9SF3-201ENST00000371142 DNAJC25-GNG10A0A024R161 153 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 ADAMTS4O75173 837 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 CHRM4P08173 479 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 GAAP10253 952 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 SERPINA2P20848 420 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 ADAMTS16Q8TE57 1224 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 ZNF334Q9HCZ1 680 aaPredicted RBP20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 TMEM100Q9NV29 134 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 ZNF337Q9Y3M9 751 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 KDM4EB2RXH2 506 aaPredicted RBP20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 CYCSP99999 105 aaKnown RBP20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 RAB40BQ12829 278 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 SYPL1Q16563 259 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 VASH1Q7L8A9 365 aaPredicted RBP20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 RBM12BQ8IXT5 1001 aaKnown RBP20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 BCL7BQ9BQE9 202 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 MYH6P13533 1939 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 C1SP09871 688 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 T-ENOLP0DO92 83 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 ZP2Q05996 745 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 SPOCK1Q08629 439 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 C9orf135Q5VTT2 229 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 EGLN2Q96KS0 407 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 TAS2R31P59538 309 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 TAS2R20P59543 309 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 VASNQ6EMK4 673 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 ZNF587Q96SQ5 575 aaPredicted RBP20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 CLMPQ9H6B4 373 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 TESQ9UGI8 421 aaKnown RBP20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 ZNF254O75437 659 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 TLDC1Q6P9B6 456 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 ENKD1Q9H0I2 346 aa20.76■□□□□ 0.91
TM9SF3-201ENST00000371142 KRBA1A5PL33 1030 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 INHBCP55103 352 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 CNN3Q15417 329 aaKnown RBP20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 B3GNT8Q7Z7M8 397 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 CD163Q86VB7 1156 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 ZNF610Q8N9Z0 462 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 C22orf15Q8WYQ4 148 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 ZFP57Q9NU63 452 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 ATPIF1Q9UII2 106 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 ASB4Q9Y574 426 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 MAOAP21397 527 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 SPRED3Q2MJR0 410 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 BTBD2Q9BX70 525 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 GCM1Q9NP62 436 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 TMEM45AQ9NWC5 275 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 LRIT1Q9P2V4 623 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 SLC6A14Q9UN76 642 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 ARGFXA6NJG6 315 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 CD300LBA8K4G0 201 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 MMP2P08253 660 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 HIST1H1TP22492 207 aaPredicted RBP20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 CAV3P56539 151 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 ARHGAP19Q14CB8 494 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 GORASP2Q9H8Y8 452 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 SLC6A5Q9Y345 797 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 AOAHP28039 575 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 PRLHRP49683 370 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 MEPCEQ7L2J0 689 aaKnown RBP20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 GPR155Q7Z3F1 870 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 SPIN2AQ99865 258 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 SPIN2BQ9BPZ2 258 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 LMF2Q9BU23 707 aaKnown RBP20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 UNKLQ9H9P5 680 aaKnown RBP20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 DYRK1AQ13627 763 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 RAB31Q13636 194 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 ZNF322Q6U7Q0 402 aaPredicted RBP20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 TMEM163Q8TC26 289 aa20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 ACOT11Q8WXI4 607 aaPredicted RBP20.75■□□□□ 0.91
TM9SF3-201ENST00000371142 SF3A2Q15428 464 aaKnown RBP20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 MOB3CQ70IA8 216 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 TMEFF1Q8IYR6 380 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 USB1Q9BQ65 265 aaKnown RBP20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 CLSTN3Q9BQT9 956 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 SMIM3Q9BZL3 60 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 SRPK3Q9UPE1 567 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 CAMK2AQ9UQM7 478 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 V9GY05 133 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 SRPX2O60687 465 aaPredicted RBP20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 HLA-DMAP28067 261 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 CPOXP36551 454 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 MAT1AQ00266 395 aaKnown RBP20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 LRRC18Q8N456 261 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 HCAR1Q9BXC0 346 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 RASD1Q9Y272 281 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 NUP188Q5SRE5 1749 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 LOC105369274A0A096LPK9 316 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 MT-CO2P00403 227 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 CPMP14384 443 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 OR4N4Q8N0Y3 316 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 ZFP90Q8TF47 636 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 ARL11Q969Q4 196 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 MALSU1Q96EH3 234 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 MYH3P11055 1940 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 HTR3AP46098 478 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 OR1D4P47884 311 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 MBTPS1Q14703 1052 aa20.74■□□□□ 0.91
TM9SF3-201ENST00000371142 WBP2NLQ6ICG8 309 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms