RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 HRASLS5Q96KN8 279 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 EGFL8Q99944 293 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 SLC30A2Q9BRI3 323 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 COPS4Q9BT78 406 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 TRIM8Q9BZR9 551 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 REXO4Q9GZR2 422 aaKnown RBP13.72□□□□□ -0.21
LMO4-201ENST00000370542 RHBGQ9H310 441 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 CHST11Q9NPF2 352 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 TRPS1Q9UHF7 1281 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 PSORS1C1Q9UIG5 152 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 ZNF223Q9UK11 482 aaPredicted RBP13.72□□□□□ -0.21
LMO4-201ENST00000370542 ZNF490Q9ULM2 529 aaPredicted RBP13.72□□□□□ -0.21
LMO4-201ENST00000370542 MAPRE3Q9UPY8 281 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 POLR3HQ9Y535 204 aaPredicted RBP13.72□□□□□ -0.21
LMO4-201ENST00000370542 SYNDIG1LA6NDD5 238 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 CYR61O00622 381 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 MPZL2O60487 215 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 PGRP06401 933 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 DBTP11182 482 aaKnown RBP13.71□□□□□ -0.21
LMO4-201ENST00000370542 PTGER4P35408 488 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 GZMMP51124 257 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 DAPP51397 102 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 IST1P53990 364 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 RAB38P57729 211 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 OC90Q02509 493 aaPredicted RBP13.71□□□□□ -0.21
LMO4-201ENST00000370542 PCDH1Q08174 1060 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 NPRL3Q12980 569 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 GPR50Q13585 617 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 SIGIRRQ6IA17 410 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 TRIM46Q7Z4K8 759 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 CYP4Z1Q86W10 505 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 PLCZ1Q86YW0 608 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 SNX29P2Q8IUI4 249 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 KRT78Q8N1N4 520 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 ACBD4Q8NC06 268 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 FAM98AQ8NCA5 519 aaKnown RBP13.71□□□□□ -0.21
LMO4-201ENST00000370542 OR2L5Q8NG80 312 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 C16orf52Q8NHV5 167 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 SUN5Q8TC36 379 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 WDFY2Q96P53 400 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 CDADC1Q9BWV3 514 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 TINAGQ9UJW2 476 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 MEMO1Q9Y316 297 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 ASB1Q9Y576 335 aa13.71□□□□□ -0.21
LMO4-201ENST00000370542 CACNA1CQ13936 2221 aa13.71□□□□□ -0.22
LMO4-201ENST00000370542 SH3D21A4FU49 640 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 TMEM200CA6NKL6 621 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 CLCA1A8K7I4 914 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 NPIPA5E9PKD4 350 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 PRKCAP17252 672 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 EPORP19235 508 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 PPIBP23284 216 aaKnown RBP13.7□□□□□ -0.22
LMO4-201ENST00000370542 ERP29P30040 261 aaKnown RBP13.7□□□□□ -0.22
LMO4-201ENST00000370542 S100A3P33764 101 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 GGT2P36268 569 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 CASP6P55212 293 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 RAB25P57735 213 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 BTN3A2P78410 334 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 SLBPQ14493 270 aaKnown RBP eCLIP13.7□□□□□ -0.22
LMO4-201ENST00000370542 ABHD17CQ6PCB6 329 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 ZNF767PQ75MW2 155 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 EIF3MQ7L2H7 374 aaKnown RBP13.7□□□□□ -0.22
LMO4-201ENST00000370542 FGD2Q7Z6J4 655 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 MILR1Q7Z6M3 343 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 TMEM179BQ7Z7N9 219 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 ZNF595Q8IYB9 648 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 ZZZ3Q8IYH5 903 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 GHDCQ8N2G8 530 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 FAM86B1Q8N7N1 296 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 TMEM52Q8NDY8 209 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 ALOXE3Q9BYJ1 711 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 DEFB126Q9BYW3 111 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 PRDM7Q9NQW5 492 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 PLSCR2Q9NRY7 297 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 TAS2R9Q9NYW1 312 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 CNOT2Q9NZN8 540 aaKnown RBP13.7□□□□□ -0.22
LMO4-201ENST00000370542 ZNF225Q9UK10 706 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 DAPP1Q9UN19 280 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 NPIPA1Q9UND3 350 aa13.7□□□□□ -0.22
LMO4-201ENST00000370542 SLC35F4A4IF30 521 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 EFCAB10A6NFE3 127 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 ADAM10O14672 748 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 ERI3O43414 337 aaKnown RBP13.69□□□□□ -0.22
LMO4-201ENST00000370542 PDE9AO76083 593 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 SEMG1P04279 462 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 SPNP16150 400 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 CD22P20273 847 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 ZNF10P21506 573 aaPredicted RBP13.69□□□□□ -0.22
LMO4-201ENST00000370542 PRKACGP22612 351 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 GADD45AP24522 165 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 DGKQP52824 942 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 CLDN8P56748 225 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 LAPTM5Q13571 262 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 GTF2H2Q13888 395 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 VEZF1Q14119 521 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 FAM174BQ3ZCQ3 159 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 ARMC4Q5T2S8 1044 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 GTF2H2CQ6P1K8 395 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 AHSA2Q719I0 299 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 GDF7Q7Z4P5 450 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms