RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 CPEB1Q9BZB8 566 aaKnown RBP14.92□□□□□ -0.02
COL17A1-202ENST00000369733 CROCCQ5TZA2 2017 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 SGCEO43556 437 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 MEF2DQ14814 521 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 SLC6A19Q695T7 634 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 HOXB13Q92826 284 aaPredicted RBP14.92□□□□□ -0.02
COL17A1-202ENST00000369733 WDR92Q96MX6 357 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 ACSS1Q9NUB1 689 aaPredicted RBP14.92□□□□□ -0.02
COL17A1-202ENST00000369733 A0A1W2PQU0 124 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 ATP6V1G2-DDX39BF2Z307 99 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 FURINP09958 794 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 ENDOUP21128 410 aaKnown RBP14.92□□□□□ -0.02
COL17A1-202ENST00000369733 CCR6P51684 374 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 RPL22L1Q6P5R6 122 aaKnown RBP14.92□□□□□ -0.02
COL17A1-202ENST00000369733 SLC16A9Q7RTY1 509 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 NANOGP1Q8N7R0 232 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 OR14K1Q8NGZ2 314 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 ZFAND1Q8TCF1 268 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 MYLIPQ8WY64 445 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 PGAP2Q9UHJ9 254 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 GABRQQ9UN88 632 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 MYH9P35579 1960 aaKnown RBP14.92□□□□□ -0.02
COL17A1-202ENST00000369733 TAS2R19P59542 299 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 EIF2B1Q14232 305 aaKnown RBP14.92□□□□□ -0.02
COL17A1-202ENST00000369733 AADACL4Q5VUY2 407 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 FIGLAQ6QHK4 219 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 DPPA4Q7L190 304 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 A0A0D9SG52 128 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 HHLA1C9JL84 531 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 NPC1O15118 1278 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 RNGTTO60942 597 aaKnown RBP14.91□□□□□ -0.02
COL17A1-202ENST00000369733 VEGFCP49767 419 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 GRM7Q14831 915 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 RBMS2Q15434 407 aaKnown RBP14.91□□□□□ -0.02
COL17A1-202ENST00000369733 OR1Q1Q15612 314 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 ZNF674Q2M3X9 581 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 TSSK4Q6SA08 328 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 BEND4Q6ZU67 534 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 RFPL4BQ6ZWI9 263 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 NLRP8Q86W28 1048 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 LGALS14Q8TCE9 139 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 DUSP19Q8WTR2 217 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 ISG20Q96AZ6 181 aaKnown RBP14.91□□□□□ -0.02
COL17A1-202ENST00000369733 FOXRED1Q96CU9 486 aaPredicted RBP14.91□□□□□ -0.02
COL17A1-202ENST00000369733 ZNF416Q9BWM5 594 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 WASH6PQ9NQA3 447 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 FBXL2Q9UKC9 423 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 N4BP2Q86UW6 1770 aaPredicted RBP14.91□□□□□ -0.02
COL17A1-202ENST00000369733 SYT7O43581 403 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 CLEC3AO75596 197 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 GPX5O75715 221 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 IFNA1P01562 189 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 ZNF35P13682 527 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 SLC19A1P41440 591 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 PRLHRP49683 370 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 ZNF322Q6U7Q0 402 aaPredicted RBP14.91□□□□□ -0.02
COL17A1-202ENST00000369733 OR4M1Q8NGD0 313 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 ABHD4Q8TB40 342 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 PKMYT1Q99640 499 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 PITHD1Q9GZP4 211 aaPredicted RBP14.91□□□□□ -0.02
COL17A1-202ENST00000369733 PPT2Q9UMR5 302 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 POLHQ9Y253 713 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 ZNF254O75437 659 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 C1SP09871 688 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 CXADRP78310 365 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 HTR4Q13639 388 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 PPA1Q15181 289 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 PELOQ9BRX2 385 aaKnown RBP14.91□□□□□ -0.02
COL17A1-202ENST00000369733 PTGES2Q9H7Z7 377 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 C2orf42Q9NWW7 574 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 GMDSO60547 372 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 HLA-AP01891 365 aaKnown RBP14.91□□□□□ -0.02
COL17A1-202ENST00000369733 GPR50Q13585 617 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 ZC3H14Q6PJT7 736 aaKnown RBP14.91□□□□□ -0.02
COL17A1-202ENST00000369733 RLIMQ9NVW2 624 aa14.91□□□□□ -0.02
COL17A1-202ENST00000369733 I6L893 689 aaPredicted RBP14.9□□□□□ -0.02
COL17A1-202ENST00000369733 BTG1P62324 171 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 OC90Q02509 493 aaPredicted RBP14.9□□□□□ -0.02
COL17A1-202ENST00000369733 CCNJQ5T5M9 372 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 CD276Q5ZPR3 534 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 LMNTD1Q8N9Z9 388 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 OR10K1Q8NGX5 313 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 TMEM38AQ9H6F2 299 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 SLC25A37Q9NYZ2 338 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 ZNF281Q9Y2X9 895 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 ZNF780AO75290 641 aaPredicted RBP14.9□□□□□ -0.02
COL17A1-202ENST00000369733 GAAP10253 952 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 PIPP12273 146 aaPredicted RBP14.9□□□□□ -0.02
COL17A1-202ENST00000369733 HOXC12P31275 282 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 PDE7AQ13946 482 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 IRF4Q15306 451 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 NXNL2Q5VZ03 156 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 CD163Q86VB7 1156 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 SLC35F3Q8IY50 421 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 LAS2Q8IYD9 372 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 GHSRQ92847 366 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 PEX11GQ96HA9 241 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 MYADMQ96S97 322 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 TCEAL7Q9BRU2 100 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 HOXD1Q9GZZ0 328 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms