RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 OC90Q02509 493 aaPredicted RBP2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 BCL2L1Q07817 233 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 SYPL1Q16563 259 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 C10orf120Q5SQS8 335 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 TTC23Q5W5X9 447 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 FAHD2BQ6P2I3 314 aaPredicted RBP2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 APTXQ7Z2E3 356 aaKnown RBP2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 CATSPER1Q8NEC5 780 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 OR2L5Q8NG80 312 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 PAQR8Q8TEZ7 354 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 CTNNBL1Q8WYA6 563 aaPredicted RBP2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 PELI1Q96FA3 418 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 FAHD2AQ96GK7 314 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 AMDHD1Q96NU7 426 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 PLEKHF1Q96S99 279 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 ZSCAN5AQ9BUG6 496 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 EDEM2Q9BV94 578 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 CHIAQ9BZP6 476 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 Q9H3A6 140 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 ABCB10Q9NRK6 738 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 TMEM9Q9P0T7 183 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 OR1A1Q9P1Q5 309 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 ABCG2Q9UNQ0 655 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 OR10H1Q9Y4A9 318 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 MAB21L2Q9Y586 359 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 FRMPD3Q5JV73 1810 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 TDRD6O60522 2096 aaKnown RBP2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 TUBAL3A6NHL2 446 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 DHRS7CA6NNS2 312 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 TMEM110-MUSTN1A8MSY1 372 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 K7EQM0 130 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 KIF2AO00139 706 aaPredicted RBP2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 WWP2O00308 870 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 BTN3A3O00478 584 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 PRRG1O14668 218 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 MSH4O15457 936 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 IDH1O75874 414 aaKnown RBP2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 CABYRO75952 493 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 HSPB1P04792 205 aaKnown RBP2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 PTMAP06454 111 aaKnown RBP2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 ALOX5P09917 674 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 CD1EP15812 388 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 SERPINA2P20848 420 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 ZP3P21754 424 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 CD80P33681 288 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 IFNAR2P48551 515 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 DIO3P55073 304 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 STX17P56962 302 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 RPS14P62263 151 aaKnown RBP2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 RIPPLY1Q0D2K3 151 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 TP53I3Q53FA7 332 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 OR2B11Q5JQS5 317 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 METTL11BQ5VVY1 283 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 OR5M10Q6IEU7 315 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 FAM71F2Q6NXP2 309 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 TFAP2EQ6VUC0 442 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 FRA10AC1Q70Z53 315 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 MOB1BQ7L9L4 216 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 TMEM110Q86TL2 294 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 C17orf82Q86X59 251 aaPredicted RBP2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 TMEM123Q8N131 208 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 KIR3DL3Q8N743 410 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 C14orf178Q8N769 122 aaPredicted RBP2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 STXBP6Q8NFX7 210 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 OR10H4Q8NGA5 316 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 AENQ8WTP8 325 aaKnown RBP2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 MS4A14Q96JA4 679 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 ZNF607Q96SK3 696 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 CRNKL1Q9BZJ0 848 aaKnown RBP2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 NXF5Q9H1B4 397 aaKnown RBP2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 FANCFQ9NPI8 374 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 AATFQ9NY61 560 aaKnown RBP eCLIP2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 B3GNT2Q9NY97 397 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 ANAPC11Q9NYG5 84 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 NYAP2Q9P242 653 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 ONECUT1Q9UBC0 465 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 UBQLN1Q9UMX0 589 aaKnown RBP2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 MRPS33Q9Y291 106 aaKnown RBP2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 MEMO1Q9Y316 297 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 ALG6Q9Y672 507 aa2.43□□□□□ -2.02
ECHDC1-201ENST00000368287 KDRP35968 1356 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 K7N7A8 449 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 KIAA0754O94854 1291 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 STSP08842 583 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 PTMSP20962 102 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 MMP11P24347 488 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 AQP1P29972 269 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 GCKP35557 465 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 CHI3L1P36222 383 aaPredicted RBP2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 P2RY1P47900 373 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 UBE2HP62256 183 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 CBX1P83916 185 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 OTUD4Q01804 1114 aaKnown RBP2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 EGFEM1PQ0D2K5 195 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 C1orf61Q13536 156 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 TAF7Q15545 349 aaPredicted RBP2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 AANATQ16613 207 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 CCDC152Q4G0S7 254 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 FAM43BQ6ZT52 329 aaPredicted RBP2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 SLC34A3Q8N130 599 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms