RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 ST3GAL3Q11203 375 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 RBMY1FQ15415 496 aaKnown RBP0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 ANKRD20A8PQ5CZ79 823 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 MFSD4BQ5TF39 518 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 IL23RQ5VWK5 629 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 KCTD11Q693B1 232 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 RALGPS2Q86X27 583 aaPredicted RBP0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 NRMQ8IXM6 262 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 ZFP90Q8TF47 636 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 AP2M1Q96CW1 435 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 TIMD4Q96H15 378 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 DNAJC1Q96KC8 554 aaKnown RBP0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 MLPHQ9BV36 600 aaPredicted RBP0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 ZNF355PQ9NSJ1 428 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 EIF3LQ9Y262 564 aaKnown RBP0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 TRAPPC4Q9Y296 219 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 USP16Q9Y5T5 823 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 FKBP7Q9Y680 259 aa0.31□□□□□ -2.36
RNU6-238P-201ENST00000363313 PRRC2BQ5JSZ5 2229 aaKnown RBP0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 A0A1B0GWB2 263 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 ZNF263O14978 683 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 ADCY5O95622 1261 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 RFC2P35250 354 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 TGFBR1P36897 503 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 CASP2P42575 452 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 RPL8P62917 257 aaKnown RBP0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 CCDC173Q0VFZ6 552 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 RSPO1Q2MKA7 263 aaPredicted RBP0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 AGKQ53H12 422 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 SLX4IPQ5VYV7 408 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 TMEM225Q6GV28 225 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 NET1Q7Z628 596 aaPredicted RBP0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 GPBP1Q86WP2 473 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 CCDC36Q8IYA8 594 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 C15orf56Q8N910 161 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 OR10G9Q8NGN4 311 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 MCOLN3Q8TDD5 553 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 ART4Q93070 314 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 CCDC51Q96ER9 411 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 EPSTI1Q96J88 318 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 CNDP2Q96KP4 475 aaKnown RBP0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 DDX50Q9BQ39 737 aaKnown RBP0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 TMEM206Q9H813 350 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 DEC1Q9P2X7 70 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 NARFQ9UHQ1 456 aa0.3□□□□□ -2.36
RNU6-238P-201ENST00000363313 KAT6BQ8WYB5 2073 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 PIKFYVEQ9Y2I7 2098 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 COL22A1Q8NFW1 1626 aaPredicted RBP0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 TNFSF13O75888 250 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 EPHX2P34913 555 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 KCNJ1P48048 391 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 UBE2AP49459 152 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 ST8SIA6P61647 398 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 ZP4Q12836 540 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 ZKSCAN8Q15776 578 aaPredicted RBP0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 UBE2V2Q15819 145 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 PARP6Q2NL67 630 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 C1orf141Q5JVX7 400 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 CFAP161Q6P656 301 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 METTL23Q86XA0 190 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 MIR7-3HGQ8N6C7 128 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 CNNM3Q8NE01 707 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 BMFQ96LC9 184 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 HIST1H4GQ99525 98 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 ALDH8A1Q9H2A2 487 aaPredicted RBP0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 LHX5Q9H2C1 402 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 DNAJC17Q9NVM6 304 aaKnown RBP0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 GHRLQ9UBU3 117 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 KIF25Q9UIL4 384 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 SEC16AO15027 2179 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 RAD54L2Q9Y4B4 1467 aa0.29□□□□□ -2.36
RNU6-238P-201ENST00000363313 SVILO95425 2214 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 IGHV3OR16-13A0A075B7E8 117 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 A0A1B0GUL7 405 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 ZNF850A8MQ14 1090 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 CHST1O43916 411 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 NME6O75414 186 aaPredicted RBP0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 GMNNO75496 209 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 SRP72O76094 671 aaKnown RBP0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 TLX1NBP0CAT3 122 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 H2AFXP16104 143 aaPredicted RBP0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 TNFSF9P41273 254 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 GNPDA1P46926 289 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 HERVK_113P63132 956 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 ERVK-8P63133 956 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 TFCP2Q12800 502 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 MAPRE1Q15691 268 aaKnown RBP0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 LIPKQ5VXJ0 399 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 OR8G2PQ6IF36 304 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 C11orf71Q6IPW1 123 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 PNCKQ6P2M8 343 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 TRAT1Q6PIZ9 186 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 ATAD1Q8NBU5 361 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 GMCL1P1Q8NEA9 526 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 OR5W2Q8NH69 310 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 DOK1Q99704 481 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 CITED1Q99966 193 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 SULT4A1Q9BR01 284 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 ERVK-6Q9BXR3 956 aa0.28□□□□□ -2.36
RNU6-238P-201ENST00000363313 SELENOIQ9C0D9 397 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms