RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ZNF471Q9BX82 626 aaPredicted RBP17.36■□□□□ 0.37
CLIP2-202ENST00000361545 POTEKPQ9BYX7 375 aa17.36■□□□□ 0.37
CLIP2-202ENST00000361545 KLHL9Q9P2J3 617 aa17.36■□□□□ 0.37
CLIP2-202ENST00000361545 TJP1Q07157 1748 aa17.36■□□□□ 0.37
CLIP2-202ENST00000361545 A0A1B0GUL6 1792 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 KDM4EB2RXH2 506 aaPredicted RBP17.35■□□□□ 0.37
CLIP2-202ENST00000361545 NUDT21O43809 227 aaKnown RBP17.35■□□□□ 0.37
CLIP2-202ENST00000361545 FOXD2O60548 495 aaPredicted RBP17.35■□□□□ 0.37
CLIP2-202ENST00000361545 LCKP06239 509 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 MELKQ14680 651 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 ASRGL1Q7L266 308 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 FRMD1Q8N878 549 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 OR6Q1Q8NGQ2 317 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 C1QTNF2Q9BXJ5 285 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 ACOT13Q9NPJ3 140 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 ADAM18Q9Y3Q7 739 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 NPPBP16860 134 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 EIF5AL1Q6IS14 154 aaKnown RBP17.35■□□□□ 0.37
CLIP2-202ENST00000361545 ARSKQ6UWY0 536 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 CBLL1Q75N03 491 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 CLEC14AQ86T13 490 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 LRRC20Q8TCA0 184 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 TRUB1Q8WWH5 349 aaKnown RBP17.35■□□□□ 0.37
CLIP2-202ENST00000361545 RSC1A1Q92681 617 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 ULBP2Q9BZM5 246 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 DDX31Q9H8H2 851 aaKnown RBP17.35■□□□□ 0.37
CLIP2-202ENST00000361545 GORASP2Q9H8Y8 452 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 SCN9AQ15858 1988 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 MEN1O00255 615 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 MRPL33O75394 65 aaKnown RBP17.35■□□□□ 0.37
CLIP2-202ENST00000361545 CRTAPO75718 401 aaPredicted RBP17.35■□□□□ 0.37
CLIP2-202ENST00000361545 DNAJB5O75953 348 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 KCNAB1Q14722 419 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 PROX2Q3B8N5 592 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 METRNLQ641Q3 311 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 LSMEM2Q8N112 164 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 CCDC74AQ96AQ1 378 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 ARL5BQ96KC2 179 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 KIR3DX1Q9H7L2 352 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 CNOT11Q9UKZ1 510 aaKnown RBP17.35■□□□□ 0.37
CLIP2-202ENST00000361545 A8MV72 311 aaPredicted RBP17.35■□□□□ 0.37
CLIP2-202ENST00000361545 CXCR4P61073 352 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 UGT2A3Q6UWM9 527 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 L3MBTL4Q8NA19 623 aa17.35■□□□□ 0.37
CLIP2-202ENST00000361545 WNT4P56705 351 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 CDK5R2Q13319 367 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 OR5W2Q8NH69 310 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 MRGPRX1Q96LB2 322 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 ZNF226Q9NYT6 803 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 NXT1Q9UKK6 140 aaKnown RBP17.34■□□□□ 0.37
CLIP2-202ENST00000361545 HIF3AQ9Y2N7 669 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 FAM230AA0A1W2PPH8 454 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 TNFRSF10CO14798 259 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 IGHEP01854 428 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 PKLRP30613 574 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 RGS6P49758 472 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 PFN3P60673 137 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 XKRXQ6PP77 449 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 TSSK4Q6SA08 328 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 LSM14AQ8ND56 463 aaKnown RBP17.34■□□□□ 0.37
CLIP2-202ENST00000361545 UBTD2Q8WUN7 234 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 DNAJB11Q9UBS4 358 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 CENPBD1B2RD01 187 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 TAPBPO15533 448 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 DENRO43583 198 aaKnown RBP17.34■□□□□ 0.37
CLIP2-202ENST00000361545 MPIG6BO95866 241 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 SSTR4P31391 388 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 PYCR3Q53H96 274 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 ZNF704Q6ZNC4 412 aaPredicted RBP17.34■□□□□ 0.37
CLIP2-202ENST00000361545 OR51T1Q8NGJ9 327 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 MKRN2Q9H000 416 aaKnown RBP17.34■□□□□ 0.37
CLIP2-202ENST00000361545 ABCG5Q9H222 651 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 ERVK13-1Q9NX77 482 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 NME7Q9Y5B8 376 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 TRAV18A0A075B6X5 111 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 SNTB2Q13425 540 aaKnown RBP17.34■□□□□ 0.37
CLIP2-202ENST00000361545 VASNQ6EMK4 673 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 DCDC5Q6ZRR9 648 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 ZNF709Q8N972 641 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 ZNF431Q8TF32 576 aaPredicted RBP17.34■□□□□ 0.37
CLIP2-202ENST00000361545 FER1L6-AS2Q96M78 137 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 AIFM2Q9BRQ8 373 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 SPHK1Q9NYA1 384 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 ATG4BQ9Y4P1 393 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 IGHV3-20A0A0C4DH32 117 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 OR5K3A6NET4 321 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 LRRTM2O43300 516 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 HCRTR1O43613 425 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 IGHG1P01857 330 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 ZDHHC11BP0C7U3 371 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 ARAFP10398 606 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 PHC1P78364 1004 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 MED25Q71SY5 747 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 SLC38A5Q8WUX1 472 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 SYNPO2LQ9H987 977 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 FOLH1BQ9HBA9 442 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 EBF1Q9UH73 591 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 USP22Q9UPT9 525 aa17.34■□□□□ 0.37
CLIP2-202ENST00000361545 SCN7AQ01118 1682 aa17.33■□□□□ 0.37
CLIP2-202ENST00000361545 H7C417 338 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms