RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 EDNRAP25101 427 aa18.68■□□□□ 0.58
CD47-202ENST00000361309 CDH11P55287 796 aa18.68■□□□□ 0.58
CD47-202ENST00000361309 SUMO3P55854 103 aaPredicted RBP18.68■□□□□ 0.58
CD47-202ENST00000361309 RAC3P60763 192 aa18.68■□□□□ 0.58
CD47-202ENST00000361309 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.68■□□□□ 0.58
CD47-202ENST00000361309 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.68■□□□□ 0.58
CD47-202ENST00000361309 ZNF775Q96BV0 537 aaPredicted RBP18.68■□□□□ 0.58
CD47-202ENST00000361309 ZNF524Q96C55 264 aa18.68■□□□□ 0.58
CD47-202ENST00000361309 C16orf45Q96MC5 204 aaPredicted RBP18.68■□□□□ 0.58
CD47-202ENST00000361309 ANKZF1Q9H8Y5 726 aa18.68■□□□□ 0.58
CD47-202ENST00000361309 OXSMQ9NWU1 459 aa18.68■□□□□ 0.58
CD47-202ENST00000361309 B3GALT5Q9Y2C3 310 aa18.68■□□□□ 0.58
CD47-202ENST00000361309 IGHV4-30-2A0A087WSY4 118 aa18.67■□□□□ 0.58
CD47-202ENST00000361309 H3BNH8 94 aa18.67■□□□□ 0.58
CD47-202ENST00000361309 ABCD4O14678 606 aa18.67■□□□□ 0.58
CD47-202ENST00000361309 AZIN1O14977 448 aa18.67■□□□□ 0.58
CD47-202ENST00000361309 PLIN3O60664 434 aa18.67■□□□□ 0.58
CD47-202ENST00000361309 LINC00032P0C843 101 aa18.67■□□□□ 0.58
CD47-202ENST00000361309 SLC7A1P30825 629 aa18.67■□□□□ 0.58
CD47-202ENST00000361309 RASGEF1BQ0VAM2 473 aa18.67■□□□□ 0.58
CD47-202ENST00000361309 SELENBP1Q13228 472 aa18.67■□□□□ 0.58
CD47-202ENST00000361309 MLC1Q15049 377 aa18.67■□□□□ 0.58
CD47-202ENST00000361309 CCDC153Q494R4 210 aa18.67■□□□□ 0.58
CD47-202ENST00000361309 CDC73Q6P1J9 531 aa18.67■□□□□ 0.58
CD47-202ENST00000361309 OR2W6PQ8NHA6 318 aa18.67■□□□□ 0.58
CD47-202ENST00000361309 MUCL1Q96DR8 90 aa18.67■□□□□ 0.58
CD47-202ENST00000361309 MTERF3Q96E29 417 aa18.67■□□□□ 0.58
CD47-202ENST00000361309 MRGPRX4Q96LA9 322 aa18.67■□□□□ 0.58
CD47-202ENST00000361309 ZNF300Q96RE9 604 aaPredicted RBP18.67■□□□□ 0.58
CD47-202ENST00000361309 HOXD1Q9GZZ0 328 aa18.67■□□□□ 0.58
CD47-202ENST00000361309 C12orf65Q9H3J6 166 aaKnown RBP18.67■□□□□ 0.58
CD47-202ENST00000361309 TUBB1Q9H4B7 451 aa18.67■□□□□ 0.58
CD47-202ENST00000361309 NPAP1Q9NZP6 1156 aa18.67■□□□□ 0.58
CD47-202ENST00000361309 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.67■□□□□ 0.587e-7■■■□□ 17
CD47-202ENST00000361309 LSM1O15116 133 aaKnown RBP18.66■□□□□ 0.58
CD47-202ENST00000361309 NEFHP12036 1026 aa18.66■□□□□ 0.58
CD47-202ENST00000361309 CPA3P15088 417 aa18.66■□□□□ 0.58
CD47-202ENST00000361309 IGHV1-2P23083 117 aa18.66■□□□□ 0.58
CD47-202ENST00000361309 ASMTP46597 345 aa18.66■□□□□ 0.58
CD47-202ENST00000361309 NUDT6P53370 316 aa18.66■□□□□ 0.58
CD47-202ENST00000361309 NRF1Q16656 503 aa18.66■□□□□ 0.58
CD47-202ENST00000361309 GALNTL6Q49A17 601 aa18.66■□□□□ 0.58
CD47-202ENST00000361309 DCST2Q5T1A1 773 aa18.66■□□□□ 0.58
CD47-202ENST00000361309 R3HCC1LQ7Z5L2 792 aaKnown RBP18.66■□□□□ 0.58
CD47-202ENST00000361309 ZNF614Q8N883 585 aa18.66■□□□□ 0.58
CD47-202ENST00000361309 CCDC63Q8NA47 563 aa18.66■□□□□ 0.58
CD47-202ENST00000361309 MNS1Q8NEH6 495 aa18.66■□□□□ 0.58
CD47-202ENST00000361309 RFWD2Q8NHY2 731 aa18.66■□□□□ 0.58
CD47-202ENST00000361309 TMED5Q9Y3A6 229 aa18.66■□□□□ 0.58
CD47-202ENST00000361309 KCNE3Q9Y6H6 103 aa18.66■□□□□ 0.58
CD47-202ENST00000361309 MALRD1Q5VYJ5 2156 aa18.66■□□□□ 0.58
CD47-202ENST00000361309 A0A096LNT2 108 aa18.65■□□□□ 0.58
CD47-202ENST00000361309 FAM234BA2RU67 622 aa18.65■□□□□ 0.58
CD47-202ENST00000361309 SMAD9O15198 467 aaKnown RBP18.65■□□□□ 0.58
CD47-202ENST00000361309 PHF1O43189 567 aaPredicted RBP18.65■□□□□ 0.58
CD47-202ENST00000361309 CYTIPO60759 359 aa18.65■□□□□ 0.58
CD47-202ENST00000361309 BCKDHAP12694 445 aa18.65■□□□□ 0.58
CD47-202ENST00000361309 ATP12AP54707 1039 aa18.65■□□□□ 0.58
CD47-202ENST00000361309 IRX1P78414 480 aaPredicted RBP18.65■□□□□ 0.58
CD47-202ENST00000361309 SLC25A53Q5H9E4 307 aa18.65■□□□□ 0.58
CD47-202ENST00000361309 TIMM23BQ5SRD1 257 aa18.65■□□□□ 0.58
CD47-202ENST00000361309 C6orf52Q5T4I8 152 aa18.65■□□□□ 0.58
CD47-202ENST00000361309 AGAP6Q5VW22 663 aa18.65■□□□□ 0.58
CD47-202ENST00000361309 LIPMQ5VYY2 423 aa18.65■□□□□ 0.58
CD47-202ENST00000361309 RNF165Q6ZSG1 346 aa18.65■□□□□ 0.58
CD47-202ENST00000361309 TMCO5AQ8N6Q1 288 aa18.65■□□□□ 0.58
CD47-202ENST00000361309 OR7A2PQ8NGA2 310 aa18.65■□□□□ 0.58
CD47-202ENST00000361309 ADAMTS15Q8TE58 950 aa18.65■□□□□ 0.58
CD47-202ENST00000361309 ZNF75CPQ92670 426 aaPredicted RBP18.65■□□□□ 0.58
CD47-202ENST00000361309 ADAD1Q96M93 576 aaKnown RBP18.65■□□□□ 0.58
CD47-202ENST00000361309 CACNG6Q9BXT2 260 aa18.65■□□□□ 0.58
CD47-202ENST00000361309 ACTRT3Q9BYD9 372 aa18.65■□□□□ 0.58
CD47-202ENST00000361309 ATP6V1HQ9UI12 483 aa18.65■□□□□ 0.58
CD47-202ENST00000361309 DTNAQ9Y4J8 743 aa18.65■□□□□ 0.58
CD47-202ENST00000361309 FAM153BP0C7A2 387 aa18.64■□□□□ 0.57
CD47-202ENST00000361309 FAM157CP0CG43 387 aa18.64■□□□□ 0.57
CD47-202ENST00000361309 GGT1P19440 569 aa18.64■□□□□ 0.57
CD47-202ENST00000361309 COX5AP20674 150 aa18.64■□□□□ 0.57
CD47-202ENST00000361309 CCT3P49368 545 aaKnown RBP18.64■□□□□ 0.57
CD47-202ENST00000361309 TP53BP2Q13625 1128 aa18.64■□□□□ 0.57
CD47-202ENST00000361309 QPRTQ15274 297 aa18.64■□□□□ 0.57
CD47-202ENST00000361309 FAM153CQ494X1 144 aa18.64■□□□□ 0.57
CD47-202ENST00000361309 CNPY4Q8N129 248 aa18.64■□□□□ 0.57
CD47-202ENST00000361309 OR10H5Q8NGA6 315 aa18.64■□□□□ 0.57
CD47-202ENST00000361309 OR5W2Q8NH69 310 aa18.64■□□□□ 0.57
CD47-202ENST00000361309 OR5B2Q96R09 309 aa18.64■□□□□ 0.57
CD47-202ENST00000361309 FAF1Q9UNN5 650 aaPredicted RBP18.64■□□□□ 0.57
CD47-202ENST00000361309 DNAJC15Q9Y5T4 150 aa18.64■□□□□ 0.57
CD47-202ENST00000361309 OR5H1A6NKK0 313 aa18.63■□□□□ 0.57
CD47-202ENST00000361309 ZNF724A8MTY0 619 aa18.63■□□□□ 0.57
CD47-202ENST00000361309 ESPNB1AK53 854 aa18.63■□□□□ 0.57
CD47-202ENST00000361309 NPIPB9F8W1W9 429 aa18.63■□□□□ 0.57
CD47-202ENST00000361309 SCAMP2O15127 329 aaKnown RBP18.63■□□□□ 0.57
CD47-202ENST00000361309 ZNF264O43296 627 aa18.63■□□□□ 0.57
CD47-202ENST00000361309 PGM3O95394 542 aa18.63■□□□□ 0.57
CD47-202ENST00000361309 H6PDO95479 791 aa18.63■□□□□ 0.57
CD47-202ENST00000361309 CHEK2O96017 543 aa18.63■□□□□ 0.57
CD47-202ENST00000361309 LAMP1P11279 417 aa18.63■□□□□ 0.57
CD47-202ENST00000361309 DDX5P17844 614 aaKnown RBP18.63■□□□□ 0.57
CD47-202ENST00000361309 CRHR1P34998 444 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms