RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 STMND1H3BQB6 276 aa19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 TERTO14746 1132 aaKnown RBP19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 EIF4E2O60573 245 aaKnown RBP19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 ZNF354AO60765 605 aaPredicted RBP19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 CCDC159P0C7I6 412 aa19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 OMPP47874 163 aa19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 TMED10P49755 219 aaKnown RBP19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 CRISP1P54107 249 aa19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 NUP107P57740 925 aa19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 GABARAPL2P60520 117 aa19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 COPZ1P61923 177 aa19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 CSNK2BP67870 215 aa19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 LSM11P83369 360 aaKnown RBP eCLIP19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 CDK5R2Q13319 367 aa19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 FOXB2Q5VYV0 432 aa19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 ULK3Q6PHR2 472 aa19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 ISLR2Q6UXK2 745 aa19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 NUP54Q7Z3B4 507 aa19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 TMCO6Q96DC7 493 aa19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 HS6ST2Q96MM7 605 aa19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 RPS6KB2Q9UBS0 482 aa19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 CARD8Q9Y2G2 431 aa19.22■□□□□ 0.67
MAP1LC3A-201ENST00000360668 NDUFB5O43674 189 aa19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 CHMP24386 653 aa19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 CRHBPP24387 322 aa19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 CD82P27701 267 aa19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 OTX2P32243 289 aa19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 GGT2P36268 569 aa19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 SLC6A8P48029 635 aa19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 GSSP48637 474 aa19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 NOVA1P51513 510 aaKnown RBP19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 TSPAN31Q12999 210 aa19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 NADK2Q4G0N4 442 aa19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 WDR88Q6ZMY6 472 aa19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 MARCH3Q86UD3 253 aa19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 MISPQ8IVT2 679 aa19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 NRMQ8IXM6 262 aa19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 GRHL3Q8TE85 626 aa19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 DNAJA4Q8WW22 397 aaPredicted RBP19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 TMEM239Q8WW34 195 aa19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 TTC9Q92623 222 aa19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 HGDQ93099 445 aa19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 RYDENQ9NUL5 291 aaKnown RBP19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 SELENONQ9NZV5 590 aa19.21■□□□□ 0.67
MAP1LC3A-201ENST00000360668 CNOT1A5YKK6 2376 aaKnown RBP19.2■□□□□ 0.66
MAP1LC3A-201ENST00000360668 ZAR1LA6NP61 321 aa19.2■□□□□ 0.66
MAP1LC3A-201ENST00000360668 OIP5O43482 229 aa19.2■□□□□ 0.66
MAP1LC3A-201ENST00000360668 NTN1O95631 604 aa19.2■□□□□ 0.66
MAP1LC3A-201ENST00000360668 ICAM2P13598 275 aa19.2■□□□□ 0.66
MAP1LC3A-201ENST00000360668 FPR3P25089 353 aa19.2■□□□□ 0.66
MAP1LC3A-201ENST00000360668 DLSTP36957 453 aa19.2■□□□□ 0.66
MAP1LC3A-201ENST00000360668 RBM34P42696 430 aaKnown RBP19.2■□□□□ 0.66
MAP1LC3A-201ENST00000360668 FBXW4P57775 412 aa19.2■□□□□ 0.66
MAP1LC3A-201ENST00000360668 GABREP78334 506 aa19.2■□□□□ 0.66
MAP1LC3A-201ENST00000360668 IL5RAQ01344 420 aa19.2■□□□□ 0.66
MAP1LC3A-201ENST00000360668 ALG10BQ5I7T1 473 aa19.2■□□□□ 0.66
MAP1LC3A-201ENST00000360668 LYPD8Q6UX82 237 aa19.2■□□□□ 0.66
MAP1LC3A-201ENST00000360668 SATL1Q86VE3 508 aa19.2■□□□□ 0.66
MAP1LC3A-201ENST00000360668 CADM2Q8N3J6 435 aa19.2■□□□□ 0.66
MAP1LC3A-201ENST00000360668 ARSGQ96EG1 525 aa19.2■□□□□ 0.66
MAP1LC3A-201ENST00000360668 GPA33Q99795 319 aa19.2■□□□□ 0.66
MAP1LC3A-201ENST00000360668 RTN4RQ9BZR6 473 aa19.2■□□□□ 0.66
MAP1LC3A-201ENST00000360668 ZNF160Q9HCG1 818 aa19.2■□□□□ 0.66
MAP1LC3A-201ENST00000360668 KLF4O43474 513 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 OR2J2O76002 312 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 ANGPTL1O95841 491 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 HPP00738 406 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 ADRB1P08588 477 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 FBXO45P0C2W1 286 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 ELK4P28324 431 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 TTKP33981 857 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 PTGES3Q15185 160 aaKnown RBP19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 MEP1AQ16819 746 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 WBP2NLQ6ICG8 309 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 ZNF773Q6PK81 442 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 CBLN3Q6UW01 205 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 LINC00114Q6XXX2 140 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 Q6ZPB1 254 aaPredicted RBP19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 TMCO5AQ8N6Q1 288 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 RNF217Q8TC41 542 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 RNF138Q8WVD3 245 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 FAM46AQ96IP4 442 aaKnown RBP19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 RASL10BQ96S79 203 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 CCNL2Q96S94 520 aaPredicted RBP19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 ZNF426Q9BUY5 554 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 CXorf56Q9H5V9 222 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 MRPS14O60783 128 aaKnown RBP19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 OR6B1O95007 311 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 TP53P04637 393 aaPredicted RBP19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 CELA2AP08217 269 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 CDH15P55291 814 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 TEKQ02763 1124 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 ZNF117Q03924 483 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 CTU2Q2VPK5 515 aaKnown RBP19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 CCDC71Q8IV32 467 aaPredicted RBP19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 DEPDC4Q8N2C3 294 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 GALNT15Q8N3T1 639 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 NODALQ96S42 347 aa19.19■□□□□ 0.66
MAP1LC3A-201ENST00000360668 TMEM5Q9Y2B1 443 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms