RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 ZG16BQ96DA0 208 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 ELP4Q96EB1 424 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 GIMAP5Q96F15 307 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 LRR1Q96L50 414 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 OR7D2Q96RA2 312 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 CCDC32Q9BV29 185 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 PLA2G12AQ9BZM1 189 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 POLR2J2Q9GZM3 115 aaKnown RBP6.78□□□□□ -1.32
CLCN3-202ENST00000360642 SLC38A1Q9H2H9 487 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 CRNNQ9UBG3 495 aaPredicted RBP6.78□□□□□ -1.32
CLCN3-202ENST00000360642 A0A087WUU8 490 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 EMC8O43402 210 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 RAB36O95755 333 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 APODP05090 189 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 CA3P07451 260 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 C8orf89P0DMQ9 161 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 CSNK2A2P19784 350 aaPredicted RBP6.78□□□□□ -1.32
CLCN3-202ENST00000360642 ETV5P41161 510 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 BUD31P41223 144 aaPredicted RBP6.78□□□□□ -1.32
CLCN3-202ENST00000360642 ETV1P50549 477 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 SMSP52788 366 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 PCOLCEQ15113 449 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 TRIM69Q86WT6 500 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 SRFBP1Q8NEF9 429 aaKnown RBP6.78□□□□□ -1.32
CLCN3-202ENST00000360642 NR4A3Q92570 626 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 SPSB4Q96A44 273 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 GDF15Q99988 308 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 KCNS3Q9BQ31 491 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 SLC30A2Q9BRI3 323 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 APOOQ9BUR5 198 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 SLC17A9Q9BYT1 436 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 KIR3DX1Q9H7L2 352 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 KLHL20Q9Y2M5 609 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 GRXCR1A8MXD5 290 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 K7EQS6 105 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 WWP2O00308 870 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 CYP7B1O75881 506 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 ALOX12P18054 663 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 MPIP34949 423 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 MAGEA10P43363 369 aaPredicted RBP6.77□□□□□ -1.33
CLCN3-202ENST00000360642 SGCGQ13326 291 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 KRR1Q13601 381 aaKnown RBP6.77□□□□□ -1.33
CLCN3-202ENST00000360642 RAB32Q13637 225 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 KRT33BQ14525 404 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 GPAT3Q53EU6 434 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 PLXDC1Q8IUK5 500 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 TMEM163Q8TC26 289 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 C10orf90Q96M02 699 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 WDFY2Q96P53 400 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 EGLN3Q9H6Z9 239 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 FGF20Q9NP95 211 aaPredicted RBP6.77□□□□□ -1.33
CLCN3-202ENST00000360642 NTMQ9P121 344 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 ENTPD4Q9Y227 616 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 LIPT1Q9Y234 373 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 V9GYH0 126 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 MYO10Q9HD67 2058 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 MYO9BQ13459 2157 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 IQCMA0A1B0GVH7 501 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 ACP2P11117 423 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 CMPK1P30085 196 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 OMPP47874 163 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 RORCP51449 518 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 RAB40BQ12829 278 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 TSPAN31Q12999 210 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 ZNF311Q5JNZ3 666 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 LIPKQ5VXJ0 399 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 ZNF776Q68DI1 518 aaPredicted RBP6.77□□□□□ -1.33
CLCN3-202ENST00000360642 HEPHL1Q6MZM0 1159 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 TREML4Q6UXN2 200 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 VRK2Q86Y07 508 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 OR8D4Q8NGM9 314 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 OR9A2Q8NGT5 310 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 GNPDA2Q8TDQ7 276 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 SERINC2Q96SA4 455 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 TWSG1Q9GZX9 223 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 ANKRD19PQ9H560 264 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 ANKRA2Q9H9E1 313 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 CTPS2Q9NRF8 586 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 SEMA4GQ9NTN9 838 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 MBNL3Q9NUK0 354 aaKnown RBP6.77□□□□□ -1.33
CLCN3-202ENST00000360642 FBXL12Q9NXK8 326 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 TBC1D29Q9UFV1 150 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 TRANK1O15050 2925 aa6.77□□□□□ -1.33
CLCN3-202ENST00000360642 TMEM129A0AVI4 362 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 PDZK1P1A8MUH7 402 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 KDM4EB2RXH2 506 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-202ENST00000360642 H3BQ06 376 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-202ENST00000360642 MYL12BO14950 172 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 EGR1P18146 543 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 PRKAR1BP31321 381 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 CCR9P51686 369 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 TAS2R41P59536 307 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 RAB8AP61006 207 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 TGM3Q08188 693 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 C1DQ13901 141 aaKnown RBP6.76□□□□□ -1.33
CLCN3-202ENST00000360642 SNAPC1Q16533 368 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 KLHL22Q53GT1 634 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 FAM109BQ6ICB4 259 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-202ENST00000360642 SLC27A4Q6P1M0 643 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 CCBE1Q6UXH8 406 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms