RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 CD160O95971 181 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 UGT2B7P16662 529 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 ENDOUP21128 410 aaKnown RBP15.25■□□□□ 0.03
SCAF1-201ENST00000360565 TRIM23P36406 574 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 CASP3P42574 277 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 TIAL1Q01085 375 aaKnown RBP eCLIP15.25■□□□□ 0.03
SCAF1-201ENST00000360565 DEFA5Q01523 94 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 SGCBQ16585 318 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 LINC00299Q6ZSB3 139 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 DYNC2LI1Q8TCX1 351 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 TMEM255BQ8WV15 326 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 SHDQ96IW2 340 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 LMF1Q96S06 567 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 CDCA3Q99618 268 aaPredicted RBP15.25■□□□□ 0.03
SCAF1-201ENST00000360565 RBM38Q9H0Z9 239 aaKnown RBP15.25■□□□□ 0.03
SCAF1-201ENST00000360565 MGAT4AQ9UM21 535 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 TRAV18A0A075B6X5 111 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 A0A087WUU8 490 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 CSTBP04080 98 aaKnown RBP15.25■□□□□ 0.03
SCAF1-201ENST00000360565 ZNF283Q8N7M2 679 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 COQ10AQ96MF6 247 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 ASB16Q96NS5 453 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 NECTIN4Q96NY8 510 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 GABARAPL3Q9BY60 117 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 SPNS1Q9H2V7 528 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 PLCXD1Q9NUJ7 323 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 CABIN1Q9Y6J0 2220 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 FNTBP49356 437 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 DPTQ07507 201 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 OXA1LQ15070 435 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 SYT14P1Q58G82 188 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 MBOAT2Q6ZWT7 520 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 ARL6Q9H0F7 186 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 CACNG2Q9Y698 323 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 A3GALT2U3KPV4 340 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 A0A1W2PR48 441 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 CD22P20273 847 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 SNRPGP62308 76 aaKnown RBP15.24■□□□□ 0.03
SCAF1-201ENST00000360565 SAXO2Q658L1 398 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 PRICKLE2Q7Z3G6 844 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 ZNF584Q8IVC4 421 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 DNAJC5GQ8N7S2 189 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 ZNF566Q969W8 418 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 TNFRSF13CQ96RJ3 184 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 DEFB126Q9BYW3 111 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 GMEB2Q9UKD1 530 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 DISC1C4P0D8 188 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 LCMT2O60294 686 aaKnown RBP15.24■□□□□ 0.03
SCAF1-201ENST00000360565 RLN2P04090 185 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 PUDPQ08623 228 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 CRMP1Q14194 572 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 ACSM5Q6NUN0 579 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 MFSD12Q6NUT3 480 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 FAHD1Q6P587 224 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 PAQR6Q6TCH4 344 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 FTMTQ8N4E7 242 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 CLDN22Q8N7P3 220 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 SPERTQ8NA61 448 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 C19orf25Q9UFG5 118 aaPredicted RBP15.24■□□□□ 0.03
SCAF1-201ENST00000360565 WASHC1A8K0Z3 465 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 NR2C1P13056 603 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 WDR45BQ5MNZ6 344 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 C1orf94Q6P1W5 598 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 WASH2PQ6VEQ5 465 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 GDF7Q7Z4P5 450 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 LRRC28Q86X40 367 aaPredicted RBP15.24■□□□□ 0.03
SCAF1-201ENST00000360565 NKAIN4Q8IVV8 208 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 PHC2Q8IXK0 858 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 ZNF615Q8N8J6 731 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 MS4A6EQ96DS6 147 aa15.24■□□□□ 0.03
SCAF1-201ENST00000360565 TESQ9UGI8 421 aaKnown RBP15.24■□□□□ 0.03
SCAF1-201ENST00000360565 PRPH2P23942 346 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 CCDC28AQ8IWP9 274 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 COQ8AQ8NI60 647 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 KLHL15Q96M94 604 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 UBQLN3Q9H347 655 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 MED17Q9NVC6 651 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 SPHK1Q9NYA1 384 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 CA14Q9ULX7 337 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 PCDHGB2Q9Y5G2 931 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 PNMTP11086 282 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 PKLRP30613 574 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 PRKAR1BP31321 381 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 METAP1P53582 386 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 SLC18B1Q6NT16 456 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 NLRP8Q86W28 1048 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 PLXDC1Q8IUK5 500 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 OR52A5Q9H2C5 316 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 RANGRFQ9HD47 186 aaPredicted RBP15.23■□□□□ 0.03
SCAF1-201ENST00000360565 ALKBH4Q9NXW9 302 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 NRXN2Q9P2S2 1712 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 ZAR1LA6NP61 321 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 LGI1O95970 557 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 GIFP27352 417 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 TEAD1P28347 426 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 SHC1P29353 583 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 PTH2RP49190 550 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 CLRN1P58418 232 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 GPR18Q14330 331 aa15.23■□□□□ 0.03
SCAF1-201ENST00000360565 TMEM184AQ6ZMB5 413 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms