RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 C11orf98E9PRG8 122 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 TNFRSF10CO14798 259 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 SSNA1O43805 119 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 OR2B3O76000 313 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 ARHGAP11BQ3KRB8 267 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 ARHGAP11AQ6P4F7 1023 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 NANOGNBQ7Z5D8 188 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 GPALPP1Q8IXQ4 340 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 GDPD1Q8N9F7 314 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 OR4Q3Q8NH05 313 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 SMPDL3BQ92485 455 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 TM9SF4Q92544 642 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 ADAD1Q96M93 576 aaKnown RBP10.38□□□□□ -0.75
SSU72-202ENST00000359060 MOV10Q9HCE1 1003 aaKnown RBP10.38□□□□□ -0.75
SSU72-202ENST00000359060 PCDHGB7Q9Y5F8 929 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 COL4A4P53420 1690 aaPredicted RBP10.38□□□□□ -0.75
SSU72-202ENST00000359060 MKI67P46013 3256 aaKnown RBP10.38□□□□□ -0.75
SSU72-202ENST00000359060 CXCR1P25024 350 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 FOXK2Q01167 660 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 FABP5Q01469 135 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 MAPK14Q16539 360 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 NDUFAF6Q330K2 333 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 C1orf189Q5VU69 101 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 AGAP6Q5VW22 663 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 UBE2Q1Q7Z7E8 422 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 COMTD1Q86VU5 262 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 OR8K3Q8NH51 312 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 ASB15Q8WXK1 588 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 PIGKQ92643 395 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 AGAP4Q96P64 663 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 SLC2A4RGQ9NR83 387 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 TMEM129A0AVI4 362 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 KHDRBS3O75525 346 aaKnown RBP10.37□□□□□ -0.75
SSU72-202ENST00000359060 NDUFB2O95178 105 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 CELA2BP08218 269 aaPredicted RBP10.37□□□□□ -0.75
SSU72-202ENST00000359060 TFPIP10646 304 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 MAOAP21397 527 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 HTR1FP30939 366 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 OR1D4P47884 311 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 PSMD4P55036 377 aaKnown RBP10.37□□□□□ -0.75
SSU72-202ENST00000359060 ERVK-25P63136 954 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 PSPHP78330 225 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 CDK5Q00535 292 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 RPL6Q02878 288 aaKnown RBP10.37□□□□□ -0.75
SSU72-202ENST00000359060 SRSF5Q13243 272 aaKnown RBP10.37□□□□□ -0.75
SSU72-202ENST00000359060 BICRALQ6AI39 1079 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 LINGO2Q7L985 606 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 BAHD1Q8TBE0 780 aaPredicted RBP10.37□□□□□ -0.75
SSU72-202ENST00000359060 SLC6A18Q96N87 628 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.37□□□□□ -0.75
SSU72-202ENST00000359060 NANSQ9NR45 359 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 COPS7AQ9UBW8 275 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 SLC35A3Q9Y2D2 325 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 KNTC1P50748 2209 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 CDC14CA4D256 554 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 FLRT2O43155 660 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 PRAMEF2O60811 474 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 ARL6IP5O75915 188 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 FCER2P06734 321 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 SHC1P29353 583 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 PSMB10P40306 273 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 CASP3P42574 277 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 GPR143P51810 404 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 RAB38P57729 211 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 TAS2R43P59537 309 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 INSL4Q14641 139 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 C6orf183Q5T699 404 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 ARHGAP40Q5TG30 622 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 Q6ZS52 159 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 ZNF676Q8N7Q3 588 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 TMEM99Q8N816 258 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 YIPF7Q8N8F6 280 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 MORN4Q8NDC4 146 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 THAP3Q8WTV1 239 aaPredicted RBP10.37□□□□□ -0.75
SSU72-202ENST00000359060 THEM6Q8WUY1 208 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 SLC25A46Q96AG3 418 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 MED28Q9H204 178 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 ABCG5Q9H222 651 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 ANKRD19PQ9H560 264 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 LMAN1LQ9HAT1 526 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 DUSP22Q9NRW4 184 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 PRODH2Q9UF12 536 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 ITGB1BP2Q9UKP3 347 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 A0A1W2PQF6 199 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 MEIOCA2RUB1 952 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 C17orf105B2RV13 164 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 INMT-MINDY4F8WBC2 141 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 GALR3O60755 368 aaPredicted RBP10.37□□□□□ -0.75
SSU72-202ENST00000359060 SEMA7AO75326 666 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 SERPINA3P01011 423 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 CRYBB2P43320 205 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 LIMS1P48059 325 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 MTFR2Q6P444 385 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 C19orf47Q8N9M1 422 aaKnown RBP10.37□□□□□ -0.75
SSU72-202ENST00000359060 MOSPD2Q8NHP6 518 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 SLC25A19Q9HC21 320 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 TCF7L1Q9HCS4 588 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 TESQ9UGI8 421 aaKnown RBP10.37□□□□□ -0.75
SSU72-202ENST00000359060 RASD1Q9Y272 281 aa10.37□□□□□ -0.75
SSU72-202ENST00000359060 POLR1DQ9Y2S0 133 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms