RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 ST8SIA1Q92185 356 aa18.37■□□□□ 0.53
PPP1CA-202ENST00000358239 RAB8BQ92930 207 aa18.37■□□□□ 0.53
PPP1CA-202ENST00000358239 KLHDC3Q9BQ90 382 aa18.37■□□□□ 0.53
PPP1CA-202ENST00000358239 ARGLU1Q9NWB6 273 aaPredicted RBP18.37■□□□□ 0.53
PPP1CA-202ENST00000358239 KCNE5Q9UJ90 142 aa18.37■□□□□ 0.53
PPP1CA-202ENST00000358239 PROCRQ9UNN8 238 aa18.37■□□□□ 0.53
PPP1CA-202ENST00000358239 SLC35A3Q9Y2D2 325 aa18.37■□□□□ 0.53
PPP1CA-202ENST00000358239 ITPR3Q14573 2671 aa18.37■□□□□ 0.53
PPP1CA-202ENST00000358239 HIVEP1P15822 2718 aa18.37■□□□□ 0.53
PPP1CA-202ENST00000358239 UQCRHLA0A096LP55 91 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 A0A0J9YW62 118 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 SH3D21A4FU49 640 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 UBDO15205 165 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 CXCL13O43927 109 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 SS18L1O75177 396 aaPredicted RBP18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 TGDSO95455 350 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 NTN1O95631 604 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 CGAP01215 116 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 CD79BP40259 229 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 RNF144AP50876 292 aaPredicted RBP18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 CCR4P51679 360 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 CTBP2P56545 445 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 CARD18P57730 90 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 NDUFAF6Q330K2 333 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 ZNF621Q6ZSS3 439 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 MAVSQ7Z434 540 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 RNF130Q86XS8 419 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 OR6K3Q8NGY3 331 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 RFWD2Q8NHY2 731 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 LRRC8CQ8TDW0 803 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 TMEM234Q8WY98 164 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 NINJ1Q92982 152 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 CPNE4Q96A23 557 aaPredicted RBP18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 REXO5Q96IC2 774 aaKnown RBP18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 ITGB1BP2Q9UKP3 347 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 USH1CQ9Y6N9 552 aa18.36■□□□□ 0.53
PPP1CA-202ENST00000358239 C9JVG2 144 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 HMGN4O00479 90 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 RFXANKO14593 260 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 DIAPH2O60879 1101 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 KRT75O95678 551 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 PGCP20142 388 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 IL11P20809 199 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 DNAJA1P31689 397 aaKnown RBP18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 SFTPDP35247 375 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 SLC6A8P48029 635 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 FUT5Q11128 374 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 QPRTQ15274 297 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 TOMM34Q15785 309 aaPredicted RBP18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 GPAT3Q53EU6 434 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 FBXW10Q5XX13 1052 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 EPGNQ6UW88 154 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 FRRS1Q6ZNA5 592 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 HDXQ7Z353 690 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 FAM71CQ8NEG0 241 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 PMM1Q92871 262 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 OSTF1Q92882 214 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 TRNT1Q96Q11 434 aaKnown RBP18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 OR52B2Q96RD2 323 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 INPP5KQ9BT40 448 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 THUMPD3Q9BV44 507 aaKnown RBP18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 OPN3Q9H1Y3 402 aaPredicted RBP18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 RMND5AQ9H871 391 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 VIPAS39Q9H9C1 493 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 FANCFQ9NPI8 374 aa18.35■□□□□ 0.53
PPP1CA-202ENST00000358239 CASKO14936 926 aa18.34■□□□□ 0.53
PPP1CA-202ENST00000358239 OPN1LWP04000 364 aa18.34■□□□□ 0.53
PPP1CA-202ENST00000358239 UBTFL6P0CB48 400 aaPredicted RBP18.34■□□□□ 0.53
PPP1CA-202ENST00000358239 POU2F1P14859 743 aa18.34■□□□□ 0.53
PPP1CA-202ENST00000358239 PGM1P36871 562 aa18.34■□□□□ 0.53
PPP1CA-202ENST00000358239 CDKN2CP42773 168 aa18.34■□□□□ 0.53
PPP1CA-202ENST00000358239 RNPS1Q15287 305 aaKnown RBP18.34■□□□□ 0.53
PPP1CA-202ENST00000358239 ZNF239Q16600 458 aaKnown RBP18.34■□□□□ 0.53
PPP1CA-202ENST00000358239 C3orf33Q6P1S2 294 aa18.34■□□□□ 0.53
PPP1CA-202ENST00000358239 ZNF474Q6S9Z5 364 aaPredicted RBP18.34■□□□□ 0.53
PPP1CA-202ENST00000358239 MIER2Q8N344 545 aa18.34■□□□□ 0.53
PPP1CA-202ENST00000358239 ZFP90Q8TF47 636 aa18.34■□□□□ 0.53
PPP1CA-202ENST00000358239 GP6Q9HCN6 339 aa18.34■□□□□ 0.53
PPP1CA-202ENST00000358239 EXOSC3Q9NQT5 275 aaKnown RBP18.34■□□□□ 0.53
PPP1CA-202ENST00000358239 PLSCR4Q9NRQ2 329 aa18.34■□□□□ 0.53
PPP1CA-202ENST00000358239 TESMINQ9Y4I5 508 aa18.34■□□□□ 0.53
PPP1CA-202ENST00000358239 PRRC2AP48634 2157 aaKnown RBP18.34■□□□□ 0.53
PPP1CA-202ENST00000358239 CENPVL1A0A0U1RR11 272 aa18.33■□□□□ 0.52
PPP1CA-202ENST00000358239 HMGB1P1B2RPK0 211 aaPredicted RBP18.33■□□□□ 0.52
PPP1CA-202ENST00000358239 POLR3GO15318 223 aaPredicted RBP18.33■□□□□ 0.52
PPP1CA-202ENST00000358239 EFNA2O43921 213 aa18.33■□□□□ 0.52
PPP1CA-202ENST00000358239 CYP7B1O75881 506 aa18.33■□□□□ 0.52
PPP1CA-202ENST00000358239 H6PDO95479 791 aa18.33■□□□□ 0.52
PPP1CA-202ENST00000358239 ZCCHC18P0CG32 403 aa18.33■□□□□ 0.52
PPP1CA-202ENST00000358239 SLC7A1P30825 629 aa18.33■□□□□ 0.52
PPP1CA-202ENST00000358239 UGT2B10P36537 528 aa18.33■□□□□ 0.52
PPP1CA-202ENST00000358239 KCNJ5P48544 419 aa18.33■□□□□ 0.52
PPP1CA-202ENST00000358239 POLR2JP52435 117 aaKnown RBP18.33■□□□□ 0.52
PPP1CA-202ENST00000358239 FAM27E3Q08E93 113 aa18.33■□□□□ 0.52
PPP1CA-202ENST00000358239 TESK1Q15569 626 aa18.33■□□□□ 0.52
PPP1CA-202ENST00000358239 MAPK14Q16539 360 aa18.33■□□□□ 0.52
PPP1CA-202ENST00000358239 TTMPQ5BVD1 217 aa18.33■□□□□ 0.52
PPP1CA-202ENST00000358239 LRRC74BQ6ZQY2 392 aa18.33■□□□□ 0.52
PPP1CA-202ENST00000358239 CDC20BQ86Y33 519 aa18.33■□□□□ 0.52
PPP1CA-202ENST00000358239 CMIPQ8IY22 773 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms