RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 ZNF546Q86UE3 836 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 ASB13Q8WXK3 278 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 FOXRED1Q96CU9 486 aaPredicted RBP10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 GAAP10253 952 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 FXNQ16595 210 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 SLC22A6Q4U2R8 563 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 ZNF454Q8N9F8 522 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 SFXN5Q8TD22 340 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 TBC1D20Q96BZ9 403 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 GSX2Q9BZM3 304 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 IL37Q9NZH6 218 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 DVL1O14640 695 aa10.83□□□□□ -0.67
SPTBN1-202ENST00000356805 UGDHO60701 494 aa10.83□□□□□ -0.67
SPTBN1-202ENST00000356805 CHRM4P08173 479 aa10.83□□□□□ -0.67
SPTBN1-202ENST00000356805 LIPCP11150 499 aa10.83□□□□□ -0.67
SPTBN1-202ENST00000356805 DRD2P14416 443 aa10.83□□□□□ -0.67
SPTBN1-202ENST00000356805 DDCP20711 480 aa10.83□□□□□ -0.67
SPTBN1-202ENST00000356805 DVL1P1P54792 670 aaPredicted RBP10.83□□□□□ -0.67
SPTBN1-202ENST00000356805 RBMS2Q15434 407 aaKnown RBP10.83□□□□□ -0.67
SPTBN1-202ENST00000356805 ZNF585AQ6P3V2 769 aa10.83□□□□□ -0.67
SPTBN1-202ENST00000356805 A0A1W2PQU0 124 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 SLC11A1P49279 550 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 OR7A5Q15622 319 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 TECPR1Q7Z6L1 1165 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 DCAF4L2Q8NA75 395 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 LRIG1Q96JA1 1093 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 DHRS9Q9BPW9 319 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 RNF32Q9H0A6 362 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 PPP1R2P9O14990 202 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 PRAMEF11O60813 436 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 RAB3DO95716 219 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 EGFP01133 1207 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 ZNF888P0CJ79 500 aaPredicted RBP10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 MPC1LP0DKB6 136 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 TNFRSF1BP20333 461 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 HOXA1P49639 335 aaPredicted RBP10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 LMAN2Q12907 356 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 SKA3Q8IX90 412 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 DTWD1Q8N5C7 304 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 SCAMP4Q969E2 229 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 HHIPL1Q96JK4 782 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 PCDHGA1Q9Y5H4 931 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 TRIP11Q15643 1979 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 CA12O43570 354 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 SERPINA2P20848 420 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 F2RP25116 425 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 CNR2P34972 360 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 GPR50Q13585 617 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 OXA1LQ15070 435 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 ZNF765Q7L2R6 523 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 OR5W2Q8NH69 310 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 TRMT2BQ96GJ1 504 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 SFXN2Q96NB2 322 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 TXNL4BQ9NX01 149 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 SCAF4O95104 1147 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 HBE1P02100 147 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 DUSP7Q16829 419 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 LPCAT3Q6P1A2 487 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 DMBX1Q8NFW5 382 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 SYNPRQ8TBG9 265 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 RNF141Q8WVD5 230 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 RAB39BQ96DA2 213 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 MRPL38Q96DV4 380 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 ENKD1Q9H0I2 346 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 OR10A5Q9H207 317 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 OR10A2Q9H208 303 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 OR5H15A6NDH6 313 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 OR5H14A6NHG9 310 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 OR5H1A6NKK0 313 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 SCAMP2O15127 329 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 DAP3P51398 398 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 TAS2R19P59542 299 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 RPS18P62269 152 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 NRARPQ7Z6K4 114 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 ZNF75AQ96N20 296 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 NTN4Q9HB63 628 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 ZNF286AQ9HBT8 521 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 STARD5Q9NSY2 213 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 SLC7A7Q9UM01 511 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 PUS1Q9Y606 427 aaKnown RBP eCLIP10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 GABARAPO95166 117 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 XCR1P46094 333 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 OR9A2Q8NGT5 310 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 FNDC9Q8TBE3 224 aa10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 AK6Q9Y3D8 172 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-202ENST00000356805 OR5K4A6NMS3 321 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 OPN1LWP04000 364 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 IL1RNP18510 177 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 GABRB3P28472 473 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 RNF212Q495C1 297 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 LARP4Q71RC2 724 aaKnown RBP eCLIP10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 IL17RDQ8NFM7 739 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 DCBLD2Q96PD2 775 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 SLC25A31Q9H0C2 315 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 SPHK2Q9NRA0 654 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 STYXL1Q9Y6J8 313 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 ARSBP15848 533 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 GABRA5P31644 462 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 CDC20Q12834 499 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms