RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 ZNF440Q8IYI8 595 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 GTPBP8Q8N3Z3 284 aaPredicted RBP3.59□□□□□ -1.83
CNOT4-202ENST00000356162 TMCO5AQ8N6Q1 288 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 ZNF614Q8N883 585 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 HIPK4Q8NE63 616 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 ABTB1Q969K4 478 aaPredicted RBP3.59□□□□□ -1.83
CNOT4-202ENST00000356162 SLC35B4Q969S0 331 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 GNRHR2Q96P88 292 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 CITED4Q96RK1 184 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 DMRTA2Q96SC8 542 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 SH3GL1Q99961 368 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 VKORC1Q9BQB6 163 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 PIGQQ9BRB3 760 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 UGT2B28Q9BY64 529 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 KRTAP9-2Q9BYQ4 174 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 RTN4RQ9BZR6 473 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 EVA1AQ9H8M9 152 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 LIN7BQ9HAP6 207 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 MED17Q9NVC6 651 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 TAS2R10Q9NYW0 307 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 MED11Q9P086 117 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 ZNF443Q9Y2A4 671 aaPredicted RBP3.59□□□□□ -1.83
CNOT4-202ENST00000356162 ARHGAP21Q5T5U3 1957 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 CNTRLQ7Z7A1 2325 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 PHF3Q92576 2039 aaKnown RBP3.59□□□□□ -1.83
CNOT4-202ENST00000356162 NCOA6Q14686 2063 aaPredicted RBP3.59□□□□□ -1.83
CNOT4-202ENST00000356162 CENPVL1A0A0U1RR11 272 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 C17orf51A8MQB3 221 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 FAM220BPB1ANY3 271 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 NPIPA2E9PIF3 369 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 NPIPA3F8WFD2 350 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 H0Y3Z8 333 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 GTPBP1O00178 669 aaKnown RBP3.59□□□□□ -1.83
CNOT4-202ENST00000356162 ETV2O00321 342 aaPredicted RBP3.59□□□□□ -1.83
CNOT4-202ENST00000356162 FAAHO00519 579 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 ZNF264O43296 627 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 HCRTR2O43614 444 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 ZIC3O60481 467 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 DNAJA2O60884 412 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 WISP2O76076 250 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 PDE9AO76083 593 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 AGFG2O95081 481 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 FAM107AO95990 144 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 CSTAP01040 98 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 TFPTP0C1Z6 253 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 PEPDP12955 493 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 ETS2P15036 469 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 CD1EP15812 388 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 BMP7P18075 431 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 PGCP20142 388 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 POU3F2P20265 443 aaPredicted RBP3.59□□□□□ -1.83
CNOT4-202ENST00000356162 PGM1P36871 562 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 EIF1P41567 113 aaKnown RBP3.59□□□□□ -1.83
CNOT4-202ENST00000356162 CDK6Q00534 326 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 FOXF1Q12946 379 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 SCARB2Q14108 478 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 SELPLGQ14242 412 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 LARS2Q15031 903 aaKnown RBP3.59□□□□□ -1.83
CNOT4-202ENST00000356162 MAPK14Q16539 360 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 BCL2A1Q16548 175 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 CYP51A1Q16850 503 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 EIF2S3LQ2VIR3 472 aaKnown RBP3.59□□□□□ -1.83
CNOT4-202ENST00000356162 SLC25A53Q5H9E4 307 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 RPS26P11Q5JNZ5 115 aaPredicted RBP3.59□□□□□ -1.83
CNOT4-202ENST00000356162 DCST1Q5T197 706 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 RAET1LQ5VY80 246 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 VASNQ6EMK4 673 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 ERICH5Q6P6B1 374 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 DHRS4L2Q6PKH6 230 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 OLIG3Q7RTU3 272 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 PIGWQ7Z7B1 504 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 SERPINA11Q86U17 422 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 MTDHQ86UE4 582 aaKnown RBP3.59□□□□□ -1.83
CNOT4-202ENST00000356162 DOLPP1Q86YN1 238 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 GRAMD2AQ8IUY3 354 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 ZZZ3Q8IYH5 903 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 ULK2Q8IYT8 1036 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 ANKS4BQ8N8V4 417 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 C11orf65Q8NCR3 313 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 BHLHE22Q8NFJ8 381 aaPredicted RBP3.59□□□□□ -1.83
CNOT4-202ENST00000356162 OR5W2Q8NH69 310 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 NFKBIDQ8NI38 313 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 DUSP19Q8WTR2 217 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 SSC4DQ8WTU2 575 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 SLC38A5Q8WUX1 472 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 ST8SIA1Q92185 356 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 RCN3Q96D15 328 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 SH3YL1Q96HL8 342 aaPredicted RBP3.59□□□□□ -1.83
CNOT4-202ENST00000356162 SPATA5L1Q9BVQ7 753 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 IKZF5Q9H5V7 419 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 MTHFD2LQ9H903 347 aaPredicted RBP3.59□□□□□ -1.83
CNOT4-202ENST00000356162 SLAMF8Q9P0V8 285 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 ARMCX1Q9P291 453 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 KCNE5Q9UJ90 142 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 TINAGQ9UJW2 476 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 MKLN1Q9UL63 735 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 ICAM5Q9UMF0 924 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 CARD8Q9Y2G2 431 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 MEMO1Q9Y316 297 aa3.59□□□□□ -1.83
CNOT4-202ENST00000356162 SLC6A5Q9Y345 797 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms