RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 JAZF1Q86VZ6 243 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 SIAH3Q8IW03 269 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 RSPRY1Q96DX4 576 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 DMRTA2Q96SC8 542 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 NDUFB11Q9NX14 153 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 BABAM2Q9NXR7 383 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 CXXC1Q9P0U4 656 aaPredicted RBP8.74□□□□□ -1.01
SMG6-202ENST00000354901 LRRK1Q38SD2 2015 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 PTPRSQ13332 1948 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 A0A1B0GV90 55 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 LRIT2A6NDA9 550 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 SYNDIG1LA6NDD5 238 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 TBC1D3BA6NDS4 549 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 PRKYO43930 277 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 HOXB1P14653 301 aaPredicted RBP8.73□□□□□ -1.01
SMG6-202ENST00000354901 FPR3P25089 353 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 SLC6A1P30531 599 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 LIMS1P48059 325 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 VEGFCP49767 419 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 MLIPQ5VWP3 458 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 ZNF770Q6IQ21 691 aaPredicted RBP8.73□□□□□ -1.01
SMG6-202ENST00000354901 C11orf88Q6PI97 169 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 PRSS45Q7RTY3 260 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 FAM129CQ86XR2 697 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 CLDN22Q8N7P3 220 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 BPIFCQ8NFQ6 507 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 OR2L2Q8NH16 312 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 CXorf40AQ8TE69 158 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 DOK4Q8TEW6 326 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 MRPS24Q96EL2 167 aaKnown RBP8.73□□□□□ -1.01
SMG6-202ENST00000354901 TBX5Q99593 518 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 FNDC11Q9BVV2 318 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 OR52A5Q9H2C5 316 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 IL20RAQ9UHF4 553 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 ASB4Q9Y574 426 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 CEP290O15078 2479 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 TSPAN11A1L157 253 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 PRAMEF27A3QJZ7 478 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 IGLON5A6NGN9 336 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 AIPO00170 330 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 PAPLNO95428 1278 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 EPHX1P07099 455 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 KLK3P07288 261 aaPredicted RBP8.73□□□□□ -1.01
SMG6-202ENST00000354901 SRPRAP08240 638 aaKnown RBP8.73□□□□□ -1.01
SMG6-202ENST00000354901 ACP5P13686 325 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 PTBP1P26599 531 aaKnown RBP eCLIP8.73□□□□□ -1.011e-6■■■■□ 26.4
SMG6-202ENST00000354901 BSGP35613 385 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 PCP4P48539 62 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 STARP49675 285 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 HMGA2P52926 109 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 SMCO1Q147U7 214 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 FAAP20Q6NZ36 180 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 PGBD2Q6P3X8 592 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 PODNL1Q6PEZ8 512 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 Q6ZTK2 550 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 DCUN1D3Q8IWE4 304 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 CMIPQ8IY22 773 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 BMPERQ8N8U9 685 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 TMEM185AQ8NFB2 350 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 RPLP0P6Q8NHW5 317 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 OR5P2Q8WZ92 322 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 NEURL3Q96EH8 262 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 SLC6A18Q96N87 628 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 BBS4Q96RK4 519 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 MED18Q9BUE0 208 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 DNTTIP1Q9H147 329 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 SDHAF3Q9NRP4 125 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 SPHK1Q9NYA1 384 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 FBXW2Q9UKT8 454 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 KCNK6Q9Y257 313 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 SLC6A5Q9Y345 797 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 PLXNA2O75051 1894 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 SNRNP200O75643 2136 aaKnown RBP8.73□□□□□ -1.01
SMG6-202ENST00000354901 D6RAR5 112 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 AKR7A3O95154 331 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 ADAP00813 363 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 POU2F2P09086 479 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 CISD3P0C7P0 127 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 C4BPBP20851 252 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 ACSL1P33121 698 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 KCNJ5P48544 419 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 RNF144AP50876 292 aaPredicted RBP8.73□□□□□ -1.01
SMG6-202ENST00000354901 PGDP52209 483 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 NCBP2P52298 156 aaKnown RBP eCLIP8.73□□□□□ -1.01
SMG6-202ENST00000354901 SSTP61278 116 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 HTR4Q13639 388 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 KRT33BQ14525 404 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 ATXN7L3Q14CW9 347 aaPredicted RBP8.73□□□□□ -1.01
SMG6-202ENST00000354901 BEX5Q5H9J7 111 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 NHLRC3Q5JS37 347 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 C9orf64Q5T6V5 341 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 CD276Q5ZPR3 534 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 ACSM5Q6NUN0 579 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 CCDC116Q8IYX3 515 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 NRSN1Q8IZ57 195 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 MRPL43Q8N983 215 aaKnown RBP8.73□□□□□ -1.01
SMG6-202ENST00000354901 OR4K5Q8NGD3 323 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 OR6T1Q8NGN1 323 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 OR10K1Q8NGX5 313 aa8.73□□□□□ -1.01
SMG6-202ENST00000354901 PHOSPHO1Q8TCT1 267 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms