RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ATF6BQ99941 703 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 ZNF426Q9BUY5 554 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 MED20Q9H944 212 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 ISG20L2Q9H9L3 353 aaKnown RBP20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 ADAM30Q9UKF2 790 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 A0A1B0GWA3 101 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 HCRTR1O43613 425 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 CCNKO75909 580 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 ZNF3P17036 446 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 HK1P19367 917 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 EMDP50402 254 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 PLAURQ03405 335 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 TRAM1Q15629 374 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 PRTGQ2VWP7 1150 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 VASNQ6EMK4 673 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 THSD4Q6ZMP0 1018 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 ZNF595Q8IYB9 648 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 GRHL3Q8TE85 626 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 ACOT12Q8WYK0 555 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 SOSTQ9BQB4 213 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 HAO2Q9NYQ3 351 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 CYP8B1Q9UNU6 501 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 GTPBP1O00178 669 aaKnown RBP20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 MT-ND5P03915 603 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 PEPDP12955 493 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 F8A1P23610 371 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 ACAA2P42765 397 aaKnown RBP20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 RPS5P46782 204 aaKnown RBP20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 PSMD4P55036 377 aaKnown RBP20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 CAV3P56539 151 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 TMEM91Q6ZNR0 172 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 PRR23CQ6ZRP0 262 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 OAFQ86UD1 273 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 PARGQ86W56 976 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 ZNF614Q8N883 585 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 AVL9Q8NBF6 648 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 KISS1RQ969F8 398 aaPredicted RBP20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 KLHDC7BQ96G42 594 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 CAPN10Q9HC96 672 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 DNAJB12Q9NXW2 375 aaKnown RBP20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 FLRT3Q9NZU0 649 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 IFNGP01579 166 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 SLC6A6P31641 620 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 RFX3P48380 749 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 MTNR1BP49286 362 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 RPS7P62081 194 aaKnown RBP20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 C1orf61Q13536 156 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 ZNF141Q15928 474 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 AHCYL2Q96HN2 611 aaKnown RBP20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 NEDD4LQ96PU5 975 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 DCLRE1CQ96SD1 692 aaKnown RBP20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 NDC1Q9BTX1 674 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 G6PC3Q9BUM1 346 aa20.55■□□□□ 0.88
NKX2-1-201ENST00000354822 SMIM30A4D0T7 59 aa20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 CD8B2A6NJW9 211 aa20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 CLDN4O14493 209 aa20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 CD8BP10966 210 aa20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 EVX1P49640 407 aa20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 TAS2R43P59537 309 aa20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 POU4F2Q12837 409 aa20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 DEFB110Q30KQ9 67 aa20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 ALG10BQ5I7T1 473 aa20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 ULK3Q6PHR2 472 aa20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 B3GLCTQ6Y288 498 aa20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 CMIPQ8IY22 773 aa20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 TMEM99Q8N816 258 aa20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 OR10H4Q8NGA5 316 aa20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 OR51A7Q8NH64 312 aa20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 VSTM2LQ96N03 204 aa20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 ZNF578Q96N58 590 aaPredicted RBP20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 LRFN5Q96NI6 719 aa20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 HCAR1Q9BXC0 346 aa20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 HOXD1Q9GZZ0 328 aa20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 WSB2Q9NYS7 404 aaPredicted RBP20.54■□□□□ 0.88
NKX2-1-201ENST00000354822 A0A1W2PPC4 97 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 CCDC182A6NF36 153 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 RFPL3O75679 317 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 KRT8P05787 483 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 IGLV3-21P80748 117 aaPredicted RBP20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 DAB2P98082 770 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 TAB1Q15750 504 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 ZNF362Q5T0B9 420 aaPredicted RBP20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 ARHGAP11AQ6P4F7 1023 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 LINC00114Q6XXX2 140 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 GATAD2AQ86YP4 633 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 FRMD1Q8N878 549 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 SCAIQ8N9R8 606 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 OR5W2Q8NH69 310 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 TCTN2Q96GX1 697 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 TIMP4Q99727 224 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 GPR174Q9BXC1 333 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 OR51V1Q9H2C8 321 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 PPP1R3EQ9H7J1 279 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 UNC80Q8N2C7 3258 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 TRAV27A0A087WT01 109 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 A0A0A6YYC8 382 aaPredicted RBP20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 SLC9B1P1A6NJY1 282 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 TTC36A6NLP5 189 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 I3L1I5 382 aaPredicted RBP20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 SLC19A2O60779 497 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms